| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000172708 |
| Family | CE8 |
| Protein Properties | Length: 365 Molecular Weight: 40543.6 Isoelectric Point: 8.7953 |
| Chromosome | Chromosome/Scaffold: 002797415 Start: 8834 End: 11611 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 71 | 355 | 0 |
| ITVRKDGTGQFRTVTDAVNSIPSGNTRRVVVFIGGGVYTEKVLVDASKPFVTFYGDQNDVPSITFDGTALKYGTWNSSTVAVESDYFVAVNIAFVNSAPM PDGIRPGAQAVAMRISGDKAAFHNCRFIGFQDTLLDDRGRHFFKDCHVQGTVDFIFGNGKSLYLNNTIHSVANGMGVITAHARENVEDDSGFAFVHCNIT GTGDTFLGRAWRERPRVVFAYAYMGSLINKQGWSDYMHTERDKTVYYGEYKCMGPGSSSSGRVKYARMLSDEEAKPFLSLTFIKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 365 Download |
| MAPLAFLLVL NIFINSPQLG LSRPNLIPPN FSQLDSWIXH NMRDYANRKA TQXTLRFDAQ 60 LLSAEEIVRI ITVRKDGTGQ FRTVTDAVNS IPSGNTRRVV VFIGGGVYTE KVLVDASKPF 120 VTFYGDQNDV PSITFDGTAL KYGTWNSSTV AVESDYFVAV NIAFVNSAPM PDGIRPGAQA 180 VAMRISGDKA AFHNCRFIGF QDTLLDDRGR HFFKDCHVQG TVDFIFGNGK SLYLNNTIHS 240 VANGMGVITA HARENVEDDS GFAFVHCNIT GTGDTFLGRA WRERPRVVFA YAYMGSLINK 300 QGWSDYMHTE RDKTVYYGEY KCMGPGSSSS GRVKYARMLS DEEAKPFLSL TFIKGTKWVL 360 PPPKL 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 3.0e-99 | 68 | 361 | 302 | + probable pectinesterase | ||
| PLN02304 | PLN02304 | 3.0e-101 | 68 | 361 | 303 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 5.0e-102 | 69 | 359 | 302 | + pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-118 | 69 | 361 | 301 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 0 | 1 | 365 | 367 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27759.1 | 0 | 2 | 363 | 24 | 388 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI38547.1 | 0 | 27 | 365 | 30 | 365 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277518.1 | 0 | 2 | 363 | 12 | 376 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326144.1 | 0 | 1 | 365 | 5 | 374 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516214.1 | 0 | 4 | 365 | 14 | 378 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 4.2039e-45 | 67 | 359 | 1 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 4.2039e-45 | 71 | 359 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 1e-20 | 81 | 347 | 18 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 1e-20 | 81 | 347 | 18 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 1e-20 | 81 | 347 | 18 | 328 | A Chain A, Pectin Methylesterase From Carrot |
