| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000174692 |
| Family | CE8 |
| Protein Properties | Length: 276 Molecular Weight: 31025.1 Isoelectric Point: 6.7114 |
| Chromosome | Chromosome/Scaffold: 003617414 Start: 2696 End: 4479 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 33 | 271 | 0 |
| ITVDHRGKGHFLRVQQAIDSVPPNNVVWTRILISPGVYFEKVVIPREKPYIILEGNPRHLTTIEFGDAGSSATSSTFELSADNFVARHIVFKNVYDHLIE PIASKRTTWAPAALIQSDKASFYQCSFVSLQDTLTDFKGRHYFYNCFIEGAMDFIWGNGQSIYEKCQIHTLSDKIGGGCYITAQGRDSPNDTTGFVFKDC NVFGTGPILLGRAYRQFARVFASTNMENNINPEGWLAWH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 276 Download |
| MESLMAATIF ALFFLLRTLD ARYSPQDIVS TTITVDHRGK GHFLRVQQAI DSVPPNNVVW 60 TRILISPGVY FEKVVIPREK PYIILEGNPR HLTTIEFGDA GSSATSSTFE LSADNFVARH 120 IVFKNVYDHL IEPIASKRTT WAPAALIQSD KASFYQCSFV SLQDTLTDFK GRHYFYNCFI 180 EGAMDFIWGN GQSIYEKCQI HTLSDKIGGG CYITAQGRDS PNDTTGFVFK DCNVFGTGPI 240 LLGRAYRQFA RVFASTNMEN NINPEGWLAW HYSGSE 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02480 | PLN02480 | 7.0e-69 | 32 | 275 | 249 | + Probable pectinesterase | ||
| PLN02432 | PLN02432 | 4.0e-70 | 33 | 270 | 239 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-70 | 28 | 270 | 255 | + pectinesterase family protein | ||
| PLN02176 | PLN02176 | 8.0e-72 | 29 | 276 | 257 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 1.0e-93 | 25 | 276 | 255 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40838.1 | 0 | 3 | 276 | 15 | 290 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263748.1 | 0 | 11 | 276 | 10 | 277 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277604.1 | 0 | 4 | 265 | 12 | 280 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277604.1 | 1.4013e-45 | 41 | 267 | 371 | 599 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512520.1 | 0 | 26 | 276 | 26 | 279 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 1e-35 | 29 | 270 | 5 | 252 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 1e-22 | 35 | 270 | 7 | 248 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.0000000000004 | 43 | 200 | 18 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.0000000000004 | 43 | 200 | 18 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.0000000000004 | 43 | 200 | 18 | 190 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
