| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000177299 |
| Family | CE8 |
| Protein Properties | Length: 406 Molecular Weight: 45120.1 Isoelectric Point: 10.2404 |
| Chromosome | Chromosome/Scaffold: 006360226 Start: 3740 End: 6919 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 85 | 400 | 0 |
| VAKNPNAGHFTKIQAAIDSLPFINLVRVVIKVHAGVYXEKVNIPPLKSFITIEGAGADKTIVQWGDTAQTPSGPKKQPMGTFNSATFAVNSPYFIAKNIT FKNTXPVPKPGAIGKQAVAFRISADTASFXGCRFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIAQNIGALTAQGRSSMLEETGFS FVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDNIIIPKGWYNWGDPNREITLMYPSKTLKPHHNQKGGDISRWMTVFYGQYKCTGPGARFAGRVSWSREL TKEEAKPFISLTFIDG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 406 Download |
| MSTLFKHIFY VLILLLLLNS TPSQXHSKGL RPGKPDGNVH LTKNLTRAQL SEQQFMKWVK 60 FVGSLKHSVF KAAKNKLFPS FTLHVAKNPN AGHFTKIQAA IDSLPFINLV RVVIKVHAGV 120 YXEKVNIPPL KSFITIEGAG ADKTIVQWGD TAQTPSGPKK QPMGTFNSAT FAVNSPYFIA 180 KNITFKNTXP VPKPGAIGKQ AVAFRISADT ASFXGCRFLG AQDTLYDHLG RHYYKDCYIE 240 GSVDFIFGNG LSLFEGCHVH AIAQNIGALT AQGRSSMLEE TGFSFVNCKV TGSGALYLGR 300 AWGPFSRVVF AYTYMDNIII PKGWYNWGDP NREITLMYPS KTLKPHHNQK GGDISRWMTV 360 FYGQYKCTGP GARFAGRVSW SRELTKEEAK PFISLTFIDG SEWIKI 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02304 | PLN02304 | 3.0e-108 | 94 | 405 | 320 | + probable pectinesterase | ||
| PLN02432 | PLN02432 | 9.0e-110 | 92 | 405 | 314 | + putative pectinesterase | ||
| PLN02634 | PLN02634 | 5.0e-112 | 91 | 404 | 314 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 4.0e-112 | 82 | 404 | 325 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 0 | 42 | 406 | 365 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN63186.1 | 0 | 5 | 406 | 4 | 379 | hypothetical protein [Vitis vinifera] |
| RefSeq | NP_001044216.1 | 0 | 26 | 406 | 26 | 384 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_197474.1 | 0 | 20 | 406 | 23 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002330522.1 | 0 | 7 | 406 | 10 | 381 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002514210.1 | 0 | 10 | 406 | 11 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 91 | 405 | 16 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 9e-39 | 85 | 405 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 1e-25 | 85 | 392 | 35 | 352 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 0.00000000000001 | 85 | 324 | 8 | 279 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 0.00000000000001 | 85 | 324 | 8 | 279 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
