y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000181239 |
Family | CE8 |
Protein Properties | Length: 373 Molecular Weight: 42000.6 Isoelectric Point: 8.3193 |
Chromosome | Chromosome/Scaffold: 007567317 Start: 3511 End: 5268 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 63 | 337 | 0 |
IVVDKNGGGNSLTVQGAVDMVPEQNTERVKIYILPGIYREKVLVPISKPYISFIGNPNQTSETVITWNNKASDKDGLRFELGTYRTASVAIEADYFCATG ITFENSVVAVPGGYGMQAVALRVAGDKAMFYRVRVLGTQDTLLDDTGSHYFYRCHIQGSVDFIFGRSRSLYQDCVIQSTAQNSGAIAAHHRDSPNEDTGF SFVNCKIIGTGYIYLGRAWGNYSRTVYSYCHFDDIITPPGWSDWNYPSRQKFSLLFLKVQVLRRQDSGFRRIRMQ |
Full Sequence |
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Protein Sequence Length: 373 Download |
MELGVWSVFV VGFVLLFLGC IEVGFSQSEA YARNYISWDD LEVDDHKLGL NTREEHVNGS 60 RIIVVDKNGG GNSLTVQGAV DMVPEQNTER VKIYILPGIY REKVLVPISK PYISFIGNPN 120 QTSETVITWN NKASDKDGLR FELGTYRTAS VAIEADYFCA TGITFENSVV AVPGGYGMQA 180 VALRVAGDKA MFYRVRVLGT QDTLLDDTGS HYFYRCHIQG SVDFIFGRSR SLYQDCVIQS 240 TAQNSGAIAA HHRDSPNEDT GFSFVNCKII GTGYIYLGRA WGNYSRTVYS YCHFDDIITP 300 PGWSDWNYPS RQKFSLLFLK VQVLRRQDSG FRRIRMQGQR SRKKREGAMV EVFQLGGDKA 360 FSGYKIYIWR AVA 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 2.0e-81 | 62 | 313 | 252 | + putative pectinesterase | ||
PLN02665 | PLN02665 | 7.0e-83 | 61 | 313 | 256 | + pectinesterase family protein | ||
PLN02682 | PLN02682 | 2.0e-97 | 60 | 313 | 256 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 7.0e-98 | 56 | 318 | 264 | + probable pectinesterase | ||
PLN02671 | PLN02671 | 0 | 33 | 313 | 281 | + pectinesterase |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001060235.1 | 0 | 63 | 313 | 75 | 324 | Os07g0607400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_200370.1 | 0 | 33 | 313 | 36 | 332 | QRT1 (QUARTET 1); pectinesterase [Arabidopsis thaliana] |
RefSeq | XP_002264297.1 | 0 | 7 | 317 | 9 | 315 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298857.1 | 0 | 58 | 313 | 15 | 270 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002522727.1 | 0 | 1 | 313 | 24 | 335 | Pectinesterase U1 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 4e-38 | 63 | 307 | 9 | 253 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 3e-28 | 64 | 307 | 6 | 249 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 0.000000000004 | 75 | 355 | 46 | 354 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.0000000003 | 75 | 240 | 20 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.0000000003 | 75 | 240 | 20 | 192 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |