| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000193684 |
| Family | GH14 |
| Protein Properties | Length: 1395 Molecular Weight: 156008 Isoelectric Point: 4.7245 |
| Chromosome | Chromosome/Scaffold: 009067535 Start: 23105 End: 30257 |
| Description | ARM repeat superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 929 | 1350 | 0 |
| FVTLPVHSVGSLGAVRRPKAMVQSFKALAVAGVEGVVMEVWWGLVERDRPMLYNWEGYLEIVSLARRCGLKVRAVLAFHQCGAGPEDSHWIPLPLWVLEE IDKDPDLVYSDRFGRRNVEYLSLGCDMLPVLRGRSPLQAYADFMRNFRDTFRPFLGVVITGIQVGMGPAGELRYPSCPTQKLTWAWRSRELGEFQCYDKY MLASLNACAREIGMPEWGNGGPFGAANLMQDPELTEFFRSDDGSWNTSYGTFFLEWYSGMLVLHGERMCREAETIFRGTEASTSVKIAGMHWHYRTKSHP SELTAGYYNTSTRDGYLPIARMLAKYGFTLCCSGFDLQDQEERKMNPVSSPEGLLRQLLSAARLCDIPLEGETSAASLDNESLQQVVRMSKYYSYGLEKP SFSFNFVRMDKNMFEFHNWVHF | |||
| Full Sequence |
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| Protein Sequence Length: 1395 Download |
| MAMEVTQILI NAQAVDGNVR KHAEDSLRQF QEQNLPSFLL SLAGELANDE KPVESRKLAG 60 LILKNALDAK EQHRKFELGQ RWLSLDPSVK AQIKACLLKT LSSPAHDARS TASQVVAKLA 120 GIELPLKQWP ELIEALLSNN NQLPAHTRQA TLETLGYICE EVSPDAVEQD QVNKMLTAVV 180 QGMNSTETNN DVRLAATRAL HDALGFAQAN FSNDMERDYI VRVVCEATLS PEVKIRQAAF 240 ECLVSISSTY YEKLAPYIQD IFSITAKAVK EDEEPVALQA IEFWSSICDE EIDILEEYGG 300 DFTGDSSIPC FYFIKQALPA LIPLLLETLL KQEEDQDQDE VAWNVAMAGG TCLGLVARTV 360 GDDIVPLVMP FIEENITKPN WRQREAATYA FGSILEGPSP EKLMPLVNVA LTFMLNALTN 420 DPNNHVKDTT GWTLGRIFEF LHGSTLETPI ITQANCQQII TVLLQSMKDV PNVAEKACCA 480 LYFLAQGFED AGPSSSPLTP FFQDIARALL DVTHREDAGE SRLRTAAYEA LNEVVRCSTD 540 ETAPLVMQLI PVIMMELHQT LEGQKLSADE REKQNELQGL LCGCLQVIIQ KLGSSEPTKY 600 VFMQYADQMM GLFLRVFASK SATAHEEAML AIGALVYSTG SDFAKYMTEF YKYLEMGLQN 660 FEDYQVCAIT VGVVGDICRA LEDKVLPYCD GIMTQLLKDL SSNQLHRSVK PPIFSCFGDL 720 ALAIGENFEK YLMYAMPMLQ SAAELSSHTS GVDDDMVEYT NTLRNGIMEA YSGILQGFKG 780 SPKTQLLMPY APHVLQFLDS LYIEKDMDDL VIKTAIGLLG DLADTLGSAV GPLIMQSMSA 840 KEFLNECLMS DDPLIKESAE WKEMNRKEKL VQWCPRKKDY TRDIVFKDRD AAKLSSDAGG 900 SVSPDNGDLQ YELFHGFSPQ RCRRGSPVFV TLPVHSVGSL GAVRRPKAMV QSFKALAVAG 960 VEGVVMEVWW GLVERDRPML YNWEGYLEIV SLARRCGLKV RAVLAFHQCG AGPEDSHWIP 1020 LPLWVLEEID KDPDLVYSDR FGRRNVEYLS LGCDMLPVLR GRSPLQAYAD FMRNFRDTFR 1080 PFLGVVITGI QVGMGPAGEL RYPSCPTQKL TWAWRSRELG EFQCYDKYML ASLNACAREI 1140 GMPEWGNGGP FGAANLMQDP ELTEFFRSDD GSWNTSYGTF FLEWYSGMLV LHGERMCREA 1200 ETIFRGTEAS TSVKIAGMHW HYRTKSHPSE LTAGYYNTST RDGYLPIARM LAKYGFTLCC 1260 SGFDLQDQEE RKMNPVSSPE GLLRQLLSAA RLCDIPLEGE TSAASLDNES LQQVVRMSKY 1320 YSYGLEKPSF SFNFVRMDKN MFEFHNWVHF TRFVRQMSDA NAFRAKLEVD AMPDTRRSPT 1380 SLSDVTKFGM ASAYC 1440 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02161 | PLN02161 | 2.0e-94 | 927 | 1358 | 442 | + beta-amylase | ||
| PLN02801 | PLN02801 | 3.0e-99 | 927 | 1357 | 437 | + beta-amylase | ||
| PLN00197 | PLN00197 | 5.0e-147 | 924 | 1370 | 450 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 8.0e-164 | 912 | 1371 | 463 | + beta-amylase | ||
| COG5215 | KAP95 | 1.0e-173 | 16 | 870 | 862 | + Karyopherin (importin) beta [Intracellular trafficking and secretion] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0005515 | protein binding |
| GO:0006886 | intracellular protein transport |
| GO:0008565 | protein transporter activity |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI23029.1 | 0 | 1 | 864 | 80 | 942 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002276600.1 | 0 | 1 | 864 | 1 | 863 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002318437.1 | 0 | 1 | 864 | 1 | 863 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002515853.1 | 0 | 1 | 868 | 1 | 867 | importin beta-1, putative [Ricinus communis] |
| RefSeq | XP_002526256.1 | 0 | 1 | 864 | 1 | 863 | importin beta-1, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ukl_B | 0 | 3 | 866 | 1 | 871 | C Chain C, Crystal Structure Of Importin-Beta And Srebp-2 Complex |
| PDB | 1ukl_A | 0 | 3 | 866 | 1 | 871 | C Chain C, Crystal Structure Of Importin-Beta And Srebp-2 Complex |
| PDB | 3lww_C | 0 | 3 | 866 | 1 | 871 | C Chain C, Crystal Structure Of Importin-Beta And Srebp-2 Complex |
| PDB | 3lww_A | 0 | 3 | 866 | 1 | 871 | C Chain C, Crystal Structure Of Importin-Beta And Srebp-2 Complex |
| PDB | 2q5d_B | 0 | 3 | 866 | 1 | 871 | C Chain C, Crystal Structure Of Importin-Beta And Srebp-2 Complex |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778023 | 597 | 97 | 693 | 0 |
| HO778023 | 181 | 684 | 864 | 0 |
| HO794658 | 431 | 434 | 864 | 0 |
| HO433007 | 575 | 270 | 843 | 0 |
| HO794658 | 24 | 418 | 441 | 0.006 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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