Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000194876 |
Family | GH3 |
Protein Properties | Length: 654 Molecular Weight: 72380.4 Isoelectric Point: 5.2683 |
Chromosome | Chromosome/Scaffold: 012428225 Start: 3049 End: 7453 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 130 | 365 | 0 |
LENRLGIPMIYGIDAVHGNNSVYGATIFPHNVGLGASRDADLAERIGAATALEVRASGIHYTFAPCVAVCKDPRWGRCYESFSEDTEIVRKMTTVVTGLQ GQPPEGHPKGYPFVMGRNKTIACAKHFVGDGGTHKGLNEGNTISSYEDLERIHVAPYLDCISQGVSTVMASYSSWNGSKLHADRFLLTEVLKDKLGFKGF VISDWEALDRLCEPQGSDYRFCISSSVNAGVDMVMV |
Full Sequence |
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Protein Sequence Length: 654 Download |
MRVGDGXLVA SRQAMTLVAY LICSAEARKR KEEEEELKLS SKMDKVNDLN CIYRNPNEPI 60 EARVKDLLSR MTLREKAGQM TQIERQVSTP EAIRDFSIGS ILSAGGSVPF ENALSKDWXD 120 MVDGFQRSAL ENRLGIPMIY GIDAVHGNNS VYGATIFPHN VGLGASRDAD LAERIGAATA 180 LEVRASGIHY TFAPCVAVCK DPRWGRCYES FSEDTEIVRK MTTVVTGLQG QPPEGHPKGY 240 PFVMGRNKTI ACAKHFVGDG GTHKGLNEGN TISSYEDLER IHVAPYLDCI SQGVSTVMAS 300 YSSWNGSKLH ADRFLLTEVL KDKLGFKGFV ISDWEALDRL CEPQGSDYRF CISSSVNAGV 360 DMVMVPFRYE QFVEDLVYLV EHGEIPMSRI DDAVERILRV KFVAGIFEHP FSDRSLLDIV 420 GCKXHRDLAR EAVRKSLVML KNGKDPRKPF LPLDRKVKRI LVTGTHADDL GYQCGGWTAT 480 WDGRSGRITI GTTVLEAIEK AVGDDTEIIY EXCPSTETLA RQDISFAVVA VGEGPYAEFR 540 GDNLTLVIPF NGADVISSVA DRFPTLVILI SGRPLTLEPQ LLEKMDALVA AWLPGSEGEG 600 ITDVIFGDYD FEGRLPVSWF KSVEQLPMNA RDNSYDPLYP LGFGLTYNKG RSLH 660 |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN03080 | PLN03080 | 3.0e-40 | 55 | 649 | 661 | + Probable beta-xylosidase; Provisional |
pfam01915 | Glyco_hydro_3_C | 1.0e-52 | 437 | 647 | 231 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. |
pfam00933 | Glyco_hydro_3 | 4.0e-82 | 72 | 400 | 333 | + Glycosyl hydrolase family 3 N terminal domain. |
PRK15098 | PRK15098 | 9.0e-87 | 56 | 647 | 665 | + beta-D-glucoside glucohydrolase; Provisional |
COG1472 | BglX | 2.0e-91 | 71 | 502 | 440 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 49 | 654 | 1 | 639 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 71 | 654 | 1 | 586 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 45 | 654 | 109 | 720 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 50 | 653 | 5 | 602 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 51 | 649 | 4 | 602 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 52 | 648 | 4 | 600 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1iex_A | 0 | 52 | 648 | 4 | 600 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1iew_A | 0 | 52 | 648 | 4 | 600 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1iev_A | 0 | 52 | 648 | 4 | 600 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
PDB | 1ieq_A | 0 | 52 | 648 | 4 | 600 | A Chain A, Crystal Structure Of Human Class I Alpha-1,2-Mannosidase In Complex With Thio-Disaccharide Substrate Analogue |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 360 | 179 | 534 | 0 |
HO784016 | 428 | 99 | 525 | 0 |
FC882555 | 290 | 179 | 468 | 0 |
EL455042 | 314 | 106 | 419 | 0 |
HO784016 | 48 | 53 | 100 | 0.0000004 |
Sequence Alignments (This image is cropped. Click for full image.) |
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