| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000195096 |
| Family | CE8 |
| Protein Properties | Length: 345 Molecular Weight: 38448.5 Isoelectric Point: 9.5219 |
| Chromosome | Chromosome/Scaffold: 012214260 Start: 793 End: 2400 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 51 | 336 | 0 |
| KVDINGKGDFTSVQAAIDAVPEGNKQWIIIHVRKGVYREKVIIPRNKPYIFMRGNGKGRSAIVWSQSSSDNVESATFSVEAPNFIAFGISFKNEAPTGVA YTSQNQSVAAFVAADKVAFYHCGFYSTHNTLFDYKGRHYYDNCYIQGSIDFIFGRGRSVFHSCEVFVIGDKRVSIKGSVTAQNRETEKENSGFVFNKGKL YGVGDSVYLGRAKGAFSRVIYANMYLSKTVVPQGWTNWSYSGGTENLYHAEYKCKGPGAEATGRAEWARQLTEKEVAPFLSIDFIN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 345 Download |
| MAWSSSTTFI TFAIIFFTSV TLTNVVHGLT AQKVIDSPLL TQKIHTNRTL KVDINGKGDF 60 TSVQAAIDAV PEGNKQWIII HVRKGVYREK VIIPRNKPYI FMRGNGKGRS AIVWSQSSSD 120 NVESATFSVE APNFIAFGIS FKNEAPTGVA YTSQNQSVAA FVAADKVAFY HCGFYSTHNT 180 LFDYKGRHYY DNCYIQGSID FIFGRGRSVF HSCEVFVIGD KRVSIKGSVT AQNRETEKEN 240 SGFVFNKGKL YGVGDSVYLG RAKGAFSRVI YANMYLSKTV VPQGWTNWSY SGGTENLYHA 300 EYKCKGPGAE ATGRAEWARQ LTEKEVAPFL SIDFINGQEW LPVWL 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02497 | PLN02497 | 3.0e-82 | 48 | 341 | 297 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 8.0e-83 | 26 | 341 | 318 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 9.0e-85 | 50 | 341 | 292 | + putative pectinesterase | ||
| PLN02682 | PLN02682 | 2.0e-92 | 43 | 342 | 310 | + pectinesterase family protein | ||
| PLN02480 | PLN02480 | 0 | 28 | 345 | 318 | + Probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACU23222.1 | 0 | 7 | 345 | 13 | 346 | unknown [Glycine max] |
| RefSeq | NP_188331.1 | 0 | 36 | 345 | 32 | 340 | pectinesterase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002272939.1 | 0 | 10 | 345 | 11 | 348 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002311381.1 | 0 | 11 | 344 | 10 | 341 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002523016.1 | 0 | 27 | 345 | 34 | 350 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 2.94273e-44 | 52 | 341 | 11 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 2e-33 | 55 | 341 | 10 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_B | 0.0000000000002 | 60 | 343 | 18 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntq_A | 0.0000000000002 | 60 | 343 | 18 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 2ntp_B | 0.0000000000002 | 60 | 343 | 18 | 340 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
