| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000195502 |
| Family | GT5 |
| Protein Properties | Length: 1023 Molecular Weight: 116252 Isoelectric Point: 6.1248 |
| Chromosome | Chromosome/Scaffold: 012758358 Start: 1094 End: 6953 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 529 | 1012 | 0 |
| LVGGLGDVVAGLGKALQKKGHLVEIVLPKYDCMQYDRVPDLRALDLVLESYFDGXLFKNKVWVGTVEGLPVYFIEPLHPDKFXWRGXFYGEHDDFKRFSF FSRAALELLLQSGKQPDIIHCHDWQTAFVAPLYWDLYAPXGLNSARICFTCHNFEYQGXAPASELASCGLDVHQLNRPDRMQDNSAHDRINAVKGAVVFS NIVTTVSPTYAQEVLTXEGGHGLHSTLNFHSKKFNGVLNGIDADAWNPATDAYLKVQYSANDRQGKAENKEALRRTLGLSSADVKRPLVGCITRLVPQKG VHLIRHAIYRTLELGGQFVLLGSSPSEFEGLASHFENHDHVRLILKYDDSLSHAIFAASDMFIIPSIFEPCGLTQMIAMRYGSIPIVRKTGGLNDSVFDV DDDTVPLQFRNGYSFLTPNEQFFLSMIYCILTWKRQQGFNGALGRAFALYMNKPDSWQQLVQKVMNIDFSWDTSASRYEELYSK | |||
| Full Sequence |
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| Protein Sequence Length: 1023 Download |
| MAVRLTTWFV TQGLSSTGSN STSRHRSYSN ARFSFHCSPA SSCKPRHRNL SCNCVNKRHR 60 LRKKGSVEQP STTTDFRFNG NDDSESDGAS SAGVIVPIES VSDHEAPTAN GNDSILTTLT 120 PSXQANPSAY NTQDLVGMIR NAEKNIHLLN RARVNALEDL DKILGEKEAL QGQMNALEMR 180 LAETDARIRV AAQEKIKVEL LENQLDKMRN ELNLNGDGGV ERGQVEIFEN EDQLFNEEAP 240 LPYRTSINAL VANLNALRLE NQSLKNDVEA LREELSYVKN TDERVVMLEN QRSTLESALK 300 ELESKLSVSQ EXVSKLSNLK VECKGLWEKV ENLQLLLDKS TKQADQAIVV LQQNQEIQKK 360 VDKLEESLET ANVYRESSEK MQRYNELMQQ KXKLMEDRLQ RSDEEIHSYV QLYQESVEEF 420 QDTLNTLKEE SKRRAVDEXV DDMPWEFWSR LLLMIDGWLF ENKISIDDAQ VLREMVWKRE 480 RRIHDSYMAC KEKNXHDAVS TFLKLISSQT RYELSSIRRM QDCMSFILLV GGLGDVVAGL 540 GKALQKKGHL VEIVLPKYDC MQYDRVPDLR ALDLVLESYF DGXLFKNKVW VGTVEGLPVY 600 FIEPLHPDKF XWRGXFYGEH DDFKRFSFFS RAALELLLQS GKQPDIIHCH DWQTAFVAPL 660 YWDLYAPXGL NSARICFTCH NFEYQGXAPA SELASCGLDV HQLNRPDRMQ DNSAHDRINA 720 VKGAVVFSNI VTTVSPTYAQ EVLTXEGGHG LHSTLNFHSK KFNGVLNGID ADAWNPATDA 780 YLKVQYSAND RQGKAENKEA LRRTLGLSSA DVKRPLVGCI TRLVPQKGVH LIRHAIYRTL 840 ELGGQFVLLG SSPSEFEGLA SHFENHDHVR LILKYDDSLS HAIFAASDMF IIPSIFEPCG 900 LTQMIAMRYG SIPIVRKTGG LNDSVFDVDD DTVPLQFRNG YSFLTPNEQF FLSMIYCILT 960 WKRQQGFNGA LGRAFALYMN KPDSWQQLVQ KVMNIDFSWD TSASRYEELY SKSLARARAV 1020 AHA |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02316 | PLN02316 | 1.0e-129 | 545 | 1010 | 478 | + synthase/transferase | ||
| PRK00654 | glgA | 6.0e-175 | 545 | 1016 | 478 | + glycogen synthase; Provisional | ||
| PLN02939 | PLN02939 | 0 | 1 | 1021 | 1037 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 0 | 545 | 1013 | 473 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 545 | 1012 | 472 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAA16796.1 | 0 | 275 | 1020 | 303 | 1067 | starch synthase-like protein [Arabidopsis thaliana] |
| RefSeq | NP_193558.3 | 0 | 275 | 1020 | 303 | 1036 | ATSS4; transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002274716.1 | 0 | 1 | 1021 | 1 | 1009 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002298514.1 | 0 | 128 | 1019 | 28 | 883 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3guh_A | 0 | 524 | 1012 | 10 | 475 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 2r4u_A | 0 | 524 | 1012 | 10 | 475 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 2r4t_A | 0 | 524 | 1012 | 10 | 475 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
| PDB | 2qzs_A | 0 | 524 | 1012 | 10 | 475 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| PDB | 3d1j_A | 0 | 524 | 1012 | 10 | 475 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GO851132 | 333 | 590 | 917 | 0 |
| CF828776 | 286 | 640 | 920 | 0 |
| GW865616 | 298 | 621 | 913 | 0 |
| DV124304 | 258 | 579 | 836 | 0 |
| EG664148 | 262 | 545 | 806 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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