Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000197977 |
Family | GH3 |
Protein Properties | Length: 791 Molecular Weight: 85534.6 Isoelectric Point: 7.0337 |
Chromosome | Chromosome/Scaffold: 013614454 Start: 9808 End: 14456 |
Description | beta-D-xylosidase 4 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 86 | 353 | 0 |
SVSRLGIPKYEWWSEALHGVSYVGPGTKFSSLVPGATSFPQVILTAASFNTSLFEAIGRVPQVDTLFRAFQLADEENVVSTEARAMYNVGLAGLTYWSPN INIFRDPRWGRGQETPGEDPLLSSKYGSGYVRGLQQTDDGDKNKLKVAACCKHYTAYDIDNWKGVDRYHFNAVVTKQDMDDTFQPPFKSCVIDGNVASVM CSYNQVNGIPTCADPDLLAGVIRGEWKLNGYIVTDCDSIDVYYNNQHYTKTPEEAAAKAILAGLDLNC |
Full Sequence |
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Protein Sequence Length: 791 Download |
MASSIIRFSV FLCSFLFQYL LFFSQNLKGV LGQSSPVFAC NVASNATLSS FAFCDTSLGV 60 DARVADLVKR LTLPEKIGFL VNSAGSVSRL GIPKYEWWSE ALHGVSYVGP GTKFSSLVPG 120 ATSFPQVILT AASFNTSLFE AIGRVPQVDT LFRAFQLADE ENVVSTEARA MYNVGLAGLT 180 YWSPNINIFR DPRWGRGQET PGEDPLLSSK YGSGYVRGLQ QTDDGDKNKL KVAACCKHYT 240 AYDIDNWKGV DRYHFNAVVT KQDMDDTFQP PFKSCVIDGN VASVMCSYNQ VNGIPTCADP 300 DLLAGVIRGE WKLNGYIVTD CDSIDVYYNN QHYTKTPEEA AAKAILAGLD LNCGSFLGKY 360 TQGAVQAGLV NEAAIDRAIS NNFATLMRLG FFDGDPSNKP YGKLGPKDVC TSENQELAXE 420 TARQGIVLLK NSPGSLPLSP TAIKSLAVIG PNSNVTKTMI GNYEGTPCKY TTILQGLSAS 480 XATSYVPACA NVACGTAQVD DATKIAASAD ATILVVGADQ SIEAESRDRI DLYLPGQQTL 540 LVTEVAKASK GPVILVIMSG GGFDITFAKN NTKITSILWV GYPGEAGGAA VADVVFGHYN 600 PCGRLPMTWY PQSYVDKVPM TNMNMRPDAS KGYPGRTYRF YTGETVYSFG DGLSYSTFNH 660 KLVRAPKLVS IPLEEGHVCH SSSCKSLDVM EERCKNLVFD IHLGVKNAGS MSGSHTVMLF 720 SSPPAVHKSP QKHLLGFEKV FLSAQREALV KFNVDVCKHL SVVDELGNRK VALGEHVLHV 780 GSLXHSFSVR I |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-50 | 426 | 657 | 239 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
COG1472 | BglX | 2.0e-51 | 88 | 489 | 408 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-57 | 81 | 381 | 305 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 5.0e-69 | 39 | 756 | 802 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 0 | 34 | 791 | 779 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI39114.1 | 0 | 7 | 791 | 10 | 774 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264183.1 | 0 | 1 | 791 | 196 | 966 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002268626.1 | 0 | 33 | 791 | 28 | 768 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002298197.1 | 0 | 35 | 791 | 1 | 741 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002513707.1 | 0 | 30 | 791 | 33 | 777 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 0 | 182 | 754 | 128 | 696 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 3u48_A | 0 | 182 | 754 | 128 | 696 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 3u4a_B | 0 | 182 | 754 | 128 | 696 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 3u4a_A | 0 | 182 | 754 | 128 | 696 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
PDB | 1x39_A | 2e-31 | 53 | 620 | 5 | 580 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |