y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000199149 |
Family | GT5 |
Protein Properties | Length: 573 Molecular Weight: 62351.8 Isoelectric Point: 8.8531 |
Chromosome | Chromosome/Scaffold: 013386259 Start: 10252 End: 13027 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 294 | 496 | 0 |
KGRKINWMKAGILESDKLLTVSPCYAEELVSAVEKGVELDDIIRKTGIFGIVNGMDVQEWNPLTDKXTTIKYDASTVADAKPLLKETLQAEVGLPVDRDI PVIGFIGRLEEQKGSDILIEAVPHLIKEDVQIIVLGTGKKPMEKQLEQLEIEYPDKARGVAKFSVPLAHMITAGADFMLVPSRFEPCGLIQLHAMRYGTC EVV |
Full Sequence |
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Protein Sequence Length: 573 Download |
MNLEVLGTAN PSTCACFSRP SANSKLQFHP PATSVLKTTT FCTAASSAFS SHKKKQASNC 60 RFFYDSEALX XRFTVKHRNY KLMATLTASS FSSTXSHVSY GTVSSGSNLK XGFKKMVSGK 120 QTLTHNGLRA LNSVDELRVR TMANSVARQA RGKSVNSSRK TSGVIVCGSG MNLVFLGTEV 180 GPWSKTGGLG DVLGGLPPAM AVIAYFSCLA NGHRVMTISP RYDQYKDAWD TEVTVELKVG 240 DLRFAFTTLL TKADLRLRTL DFSICQMNLR ARSISLMGMV FCTGYSRLSE KPVKGRKINW 300 MKAGILESDK LLTVSPCYAE ELVSAVEKGV ELDDIIRKTG IFGIVNGMDV QEWNPLTDKX 360 TTIKYDASTV ADAKPLLKET LQAEVGLPVD RDIPVIGFIG RLEEQKGSDI LIEAVPHLIK 420 EDVQIIVLGT GKKPMEKQLE QLEIEYPDKA RGVAKFSVPL AHMITAGADF MLVPSRFEPC 480 GLIQLHAMRY GTCEVVDPAD AQAITTTVTR ALGTYGTPAF TEIISNCMAQ DLSWKGPAKK 540 WEQVLLSLGV ARSEPGIVGE EIAPLAKENV ATP 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 2.0e-6 | 172 | 240 | 69 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
COG0297 | GlgA | 5.0e-65 | 298 | 553 | 290 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 2.0e-76 | 297 | 544 | 276 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 3.0e-95 | 171 | 548 | 478 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-98 | 290 | 545 | 284 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACB97678.1 | 0 | 83 | 241 | 1 | 151 | granule bound starch synthase Ib precursor [Malus x domestica] |
GenBank | ACB97678.1 | 0 | 256 | 573 | 277 | 615 | granule bound starch synthase Ib precursor [Malus x domestica] |
RefSeq | XP_002273608.1 | 5e-34 | 83 | 244 | 1 | 152 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002273608.1 | 0 | 238 | 573 | 258 | 614 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002518931.1 | 0 | 121 | 534 | 31 | 511 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 256 | 573 | 198 | 536 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3vuf_A | 2e-17 | 171 | 241 | 10 | 72 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
PDB | 3vue_A | 0 | 256 | 573 | 198 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3vue_A | 2e-17 | 171 | 241 | 10 | 72 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 3e-36 | 297 | 548 | 194 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES793310 | 322 | 281 | 573 | 0 |
AJ568414 | 347 | 256 | 573 | 0 |
HO795316 | 314 | 291 | 573 | 0 |
EB432459 | 306 | 281 | 557 | 0 |
AJ568414 | 159 | 83 | 241 | 1e-29 |
Sequence Alignments (This image is cropped. Click for full image.) |
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