| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000201766 |
| Family | AA7 |
| Protein Properties | Length: 557 Molecular Weight: 61480.4 Isoelectric Point: 6.0959 |
| Chromosome | Chromosome/Scaffold: 011958327 Start: 11320 End: 20180 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA7 | 134 | 329 | 1.8e-27 |
| NIPDIVVFPRSEEQVSKIVRSCDKHKVPIVPYGGATSLEGHTLSPNGGVCIDMSLMNHVKALHIEDMDVVVEPGIGWMELNEYLAPYGLFFPLDPGPGAT IGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLVIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPSFKDAADV | |||
| Full Sequence |
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| Protein Sequence Length: 557 Download |
| MASWFSRLRR SSQRFFFTSS ALRTSMSTKL ARTQNTMNSE SPKTPFLFWS SSLLPVALAV 60 SAGSLALRPQ SDPSLCEAPN SNSRNEFVVK GLRKEVPQEL IDELKDVCQD NMTMDYEERD 120 NHGKPQSSFH RAVNIPDIVV FPRSEEQVSK IVRSCDKHKV PIVPYGGATS LEGHTLSPNG 180 GVCIDMSLMN HVKALHIEDM DVVVEPGIGW MELNEYLAPY GLFFPLDPGP GATIGGMCAT 240 RCSGSLAVRY GTMRDNVISL KVVLANGDIV KTASRARKSA AGYDLTRLVI GSEGTLGVIT 300 EVTLRLQKIP QYSVVAMCNF PSFKDAADVA IATMLSGIQV SRVELLDEVQ VRAINIANGK 360 NFPETPTLMF EFIGTEAYSH EQTHIVQQIV SEHNGSDFVF AEDPEAKKEL WKIRKEALWA 420 CFAMEPNFEA MITDVCVPLS CLAELISRSK EQLDASELVC TVIAHAGDGN FHTFILFDPN 480 NEEHRREAER LSHFMVHAAL SMEGTCTGEH GVGTGKMKYL EQELGMEALK TMKRIKAALD 540 PNNIMNPGKL IPAHVCF |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 8.0e-56 | 135 | 556 | 427 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 2.0e-72 | 309 | 550 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 6.0e-97 | 139 | 549 | 415 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 1.0e-128 | 103 | 552 | 464 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 23 | 557 | 543 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001142976.1 | 0 | 86 | 557 | 84 | 555 | hypothetical protein LOC100275430 [Zea mays] |
| RefSeq | NP_568170.1 | 0 | 49 | 557 | 49 | 567 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002267321.1 | 0 | 2 | 557 | 4 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322755.1 | 0 | 86 | 557 | 8 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524111.1 | 0 | 1 | 557 | 3 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 5.00264e-43 | 138 | 551 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 5.00264e-43 | 138 | 551 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 5.00264e-43 | 138 | 551 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 5.00264e-43 | 138 | 551 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 5.00264e-43 | 138 | 551 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX265038 | 330 | 150 | 477 | 0 |
| DY305587 | 296 | 192 | 487 | 0 |
| EX261606 | 322 | 207 | 524 | 0 |
| DT747637 | 285 | 179 | 463 | 0 |
| EX261606 | 50 | 505 | 554 | 2.3 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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