| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000202466 |
| Family | GH35 |
| Protein Properties | Length: 758 Molecular Weight: 85751.8 Isoelectric Point: 6.3617 |
| Chromosome | Chromosome/Scaffold: 012688235 Start: 16621 End: 26657 |
| Description | Glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH35 | 77 | 371 | 0 |
| LIIDGERRLLFSGSIHYPRSTPEMWGSLIGKAKEGGLDVIQTYVFWNRHEPQPGQYDFXXRNDLVKFIKEIQAQGLYACLRIGPFIESEWTYGGLPFWLH DVPGIFYMQNFTTKIVNLMKSEGLYASEGGPIILSQIENEYQNVEAAFHEKGPSYVRWAAKMAVDLQTGAPWVMCKQTDAPDPVINTCNGMKCGQTFGGP NSPNKPTMWTENWTSFYQVYGGEPYIRSAEDIAFHVALFIARNGSYINYYMYHGGTNFGRTGSAYVITSYYDQAPLDEYGLLRQPKWGHLKELHA | |||
| Full Sequence |
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| Protein Sequence Length: 758 Download |
| MKCVSFLKHD NDIELERHIP VNSFHTLRRG SGWGPNQPCH PSHVMTYVYT DGASVVXVIT 60 QEGCVRGEDV TYDGRSLIID GERRLLFSGS IHYPRSTPEM WGSLIGKAKE GGLDVIQTYV 120 FWNRHEPQPG QYDFXXRNDL VKFIKEIQAQ GLYACLRIGP FIESEWTYGG LPFWLHDVPG 180 IFYMQNFTTK IVNLMKSEGL YASEGGPIIL SQIENEYQNV EAAFHEKGPS YVRWAAKMAV 240 DLQTGAPWVM CKQTDAPDPV INTCNGMKCG QTFGGPNSPN KPTMWTENWT SFYQVYGGEP 300 YIRSAEDIAF HVALFIARNG SYINYYMYHG GTNFGRTGSA YVITSYYDQA PLDEYGLLRQ 360 PKWGHLKELH AAIKSCSTTL LNGTPTNFSL GQLQAAYVFS EESAGRCVAF LINNDEKSNA 420 TVQFRNASHE LLPKSIAILS DCEKEIFNTA RVNTKQNKRI IRSTKIFDAM DKWQKFTDVI 480 PNFENTSLQS DTLLEHMNVT KDVSDYLWYT LSFQHNISCA EPVLVVESLG HIGNGHGSHD 540 TKQFVMEKPI GLNNGTNNIS LLSVMVGLPF LFSTQQXFFF SAIAKDSGAF LERRFAGLRR 600 VEIQCSKKEL YNFTNYDWGY QVGLLGEKMQ IYKEENIDNV EWSDVGGSSN QPLTWYKTVF 660 EPPVGNDAVI LNLSSMGKGE AWVNDQSIGR YWVSFLTSKG KPSQTMYHVP RSFLKNSENL 720 LVLLEEYGGN PLHTSLNTIS LSTTYEPISH NELRYNNY 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 3.0e-5 | 92 | 225 | 158 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| COG1874 | LacA | 8.0e-21 | 70 | 341 | 324 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 3.0e-142 | 76 | 373 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 70 | 736 | 721 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN82672.1 | 0 | 65 | 740 | 21 | 672 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI21611.1 | 0 | 65 | 740 | 21 | 706 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002274012.1 | 0 | 65 | 740 | 57 | 735 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002306647.1 | 0 | 69 | 742 | 1 | 670 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002307056.1 | 0 | 55 | 740 | 11 | 700 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 4e-36 | 76 | 369 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3d3a_A | 0.0002 | 648 | 735 | 504 | 582 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_D | 3e-28 | 66 | 360 | 7 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_C | 3e-28 | 66 | 360 | 7 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 3thd_B | 3e-28 | 66 | 360 | 7 | 322 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| HO778160 | 737 | 70 | 751 | 0 |
| HO780602 | 610 | 120 | 697 | 0 |
| DY961675 | 286 | 69 | 343 | 0 |
| HO795552 | 548 | 160 | 675 | 0 |
| HO780602 | 32 | 697 | 728 | 0.51 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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