| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000206418 |
| Family | CE8 |
| Protein Properties | Length: 176 Molecular Weight: 19745.1 Isoelectric Point: 9.2835 |
| Chromosome | Chromosome/Scaffold: 017946229 Start: 7986 End: 8960 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 15 | 136 | 2.1e-31 |
| NTKLHVLGDTGITVITAQARDSASEDTGYSFVHCNVTGIGSGTYLGRAWRVRPQVVYAYTSMTEVVNPAGWSNDNHPERDNTVSYGEYKCIGPGSSIYNK RNLSKELTDEQVKPFISLGYIQ | |||
| Full Sequence |
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| Protein Sequence Length: 176 Download |
| MDESHRNGVF YVHVNTKLHV LGDTGITVIT AQARDSASED TGYSFVHCNV TGIGSGTYLG 60 RAWRVRPQVV YAYTSMTEVV NPAGWSNDNH PERDNTVSYG EYKCIGPGSS IYNKRNLSKE 120 LTDEQVKPFI SLGYIQGSKW LLPPPNPKWR NQDLSWGGVK KGTVDQHRRM ISQSLR 180 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02671 | PLN02671 | 8.0e-30 | 29 | 141 | 113 | + pectinesterase | ||
| PLN02432 | PLN02432 | 9.0e-34 | 29 | 141 | 113 | + putative pectinesterase | ||
| PLN02304 | PLN02304 | 2.0e-34 | 29 | 143 | 115 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 7.0e-44 | 18 | 143 | 126 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 2.0e-80 | 15 | 146 | 132 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | XP_002309337.1 | 0 | 12 | 146 | 233 | 368 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002309338.1 | 0 | 16 | 146 | 4 | 135 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002318197.1 | 0 | 12 | 146 | 229 | 364 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002321778.1 | 0 | 12 | 146 | 229 | 362 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002511043.1 | 0 | 12 | 145 | 232 | 364 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0.00000004 | 28 | 141 | 180 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0.000001 | 28 | 147 | 184 | 314 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| CN496225 | 133 | 12 | 144 | 0 |
| BQ641024 | 143 | 12 | 154 | 0 |
| CA853990 | 137 | 12 | 148 | 0 |
| BU645538 | 124 | 25 | 148 | 0 |
| EV266588 | 137 | 12 | 148 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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