| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000206503 |
| Family | CE8 |
| Protein Properties | Length: 177 Molecular Weight: 19636.9 Isoelectric Point: 7.2708 |
| Chromosome | Chromosome/Scaffold: 01878894 Start: 6827 End: 7695 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 21 | 158 | 0 |
| SLAIRISGDQAAILGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNGRSLYENCQLISMSNPVPLGTKSINGAVTAHGRASKDENTGYAFVNCFIGG TGRVWLGRAWRPFSRVVFASTTMTDIIAPEGWNDFNDP | |||
| Full Sequence |
|---|
| Protein Sequence Length: 177 Download |
| MEIMKQECCP NSEAWRCWSS SLAIRISGDQ AAILGCGFFG AQDTLHDDRG RHYFKDCYIQ 60 GSIDFIFGNG RSLYENCQLI SMSNPVPLGT KSINGAVTAH GRASKDENTG YAFVNCFIGG 120 TGRVWLGRAW RPFSRVVFAS TTMTDIIAPE GWNDFNDPTR DQYVKINARV TALLIAX 180 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02432 | PLN02432 | 2.0e-51 | 19 | 164 | 146 | + putative pectinesterase | ||
| PLN02634 | PLN02634 | 4.0e-53 | 10 | 156 | 147 | + probable pectinesterase | ||
| PLN02665 | PLN02665 | 4.0e-54 | 22 | 164 | 144 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 3.0e-62 | 21 | 164 | 144 | + pectinesterase family protein | ||
| PLN02304 | PLN02304 | 2.0e-104 | 21 | 164 | 144 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABN08648.1 | 0 | 19 | 164 | 198 | 343 | Pectinesterase [Medicago truncatula] |
| EMBL | CAN73254.1 | 0 | 19 | 162 | 204 | 347 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002267842.1 | 0 | 19 | 164 | 204 | 349 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002323171.1 | 0 | 19 | 164 | 186 | 331 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002521065.1 | 0 | 19 | 164 | 202 | 347 | Pectinesterase-1 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 5e-20 | 6 | 156 | 95 | 249 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 1e-19 | 21 | 152 | 114 | 249 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 0.00000000002 | 21 | 81 | 132 | 192 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 0.00000000002 | 21 | 81 | 132 | 192 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 0.00000000002 | 21 | 81 | 132 | 192 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DN908495 | 161 | 4 | 164 | 0 |
| GO018704 | 146 | 19 | 164 | 0 |
| GO029435 | 146 | 19 | 164 | 0 |
| DN908494 | 146 | 19 | 164 | 0 |
| EE606596 | 146 | 19 | 164 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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