| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000210114 |
| Family | GT4 |
| Protein Properties | Length: 768 Molecular Weight: 85722.7 Isoelectric Point: 9.944 |
| Chromosome | Chromosome/Scaffold: 016006277 Start: 42976 End: 47819 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT4 | 292 | 457 | 7.1e-22 |
| EDLLFAIINSVSRGKGQDLFLRSFYESLQIIKEKKLQVPSMHAVVVGSDMSKQTKYESELRNFVIEKKIQDRVHFVNKTLTVAPYLASIDVLVQNSQARG ECFGRITIEAMAFQLPVLGTAAGGTMEIVVNGTTGLLHPVGKEGTASLTSNIVKLATHVERRLTMG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 768 Download |
| MGKPANPWMG VQKKKWSLLV LALFSLSTAM VFFMRTAFDS CSANTGGRFG DGGDRTAEVV 60 HSAAGRAAGT GGPNPLDFMK SKLVLLVSHE LSLSGKNFNF LGKSESKKRS IVADGAGVLA 120 ERSGGGGCLD NEPEGGGGRR GGLQFGEQNA GPGSTGRSVF PAKGKKSIDT ALKADLVVLN 180 TAVAGKWLDA VLKENVPRVL PKVLWWIHEM RGHYFKVEYV KHLPFVAGAM IDSHTTAEYW 240 KNRTRERLGI KMPETYVVHL GNSKXLMEIA EDSVSRRVLR EHVRESLGVR NEDLLFAIIN 300 SVSRGKGQDL FLRSFYESLQ IIKEKKLQVP SMHAVVVGSD MSKQTKYESE LRNFVIEKKI 360 QDRVHFVNKT LTVAPYLASI DVLVQNSQAR GECFGRITIE AMAFQLPVLG TAAGGTMEIV 420 VNGTTGLLHP VGKEGTASLT SNIVKLATHV ERRLTMGKKG YERVKERFLE PHMAQRMASV 480 LREGSFLIPF YKLIDFCTFF VYWAALYLAM IPNGCAMPAG CSSVNFGVSC APCFRTKASA 540 FPCVSSWRAR QEVFVVVMPP LNPCAASSRF LSGDHGSLLR TIPALQRRYK SRMAPQASKD 600 VPYSFRFPPM TKKPKWWWRT LACLPYLMPL HETWMYAETA YHLHPFLEDF EFLTYPFLGA 660 IGRLPSWFLM AYFFVAYLGV VRRKEWPHFF RFHVVMGMLL EIALQVIGTV SRWMPLAVYW 720 GKVGMHFWTA IAFAYLFTVL EAIRCALAGM YADIPFVCDA AYIQIPYD |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| cd03819 | GT1_WavL_like | 7.0e-20 | 275 | 470 | 196 | + This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. | ||
| cd03798 | GT1_wlbH_like | 3.0e-20 | 306 | 483 | 182 | + This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. | ||
| cd03808 | GT1_cap1E_like | 3.0e-22 | 306 | 477 | 172 | + This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. | ||
| cd03801 | GT1_YqgM_like | 1.0e-29 | 171 | 482 | 320 | + This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. | ||
| TIGR00994 | 3a0901s05TIC20 | 4.0e-129 | 510 | 768 | 268 | + chloroplast protein import component, Tic20 family. Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the Tic20 protein [Transport and binding proteins, Amino acids, peptides and amines]. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN73426.1 | 0 | 1 | 483 | 1 | 468 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI19755.1 | 0 | 1 | 483 | 1 | 452 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002281084.1 | 0 | 1 | 483 | 1 | 468 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002327680.1 | 0 | 13 | 483 | 20 | 470 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002510442.1 | 0 | 1 | 483 | 1 | 470 | glycosyltransferase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3mbo_H | 0.000000001 | 360 | 468 | 285 | 389 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3mbo_G | 0.000000001 | 360 | 468 | 285 | 389 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3mbo_F | 0.000000001 | 360 | 468 | 285 | 389 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3mbo_E | 0.000000001 | 360 | 468 | 285 | 389 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
| PDB | 3mbo_D | 0.000000001 | 360 | 468 | 285 | 389 | A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate |
