| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000211550 |
| Family | AA7 |
| Protein Properties | Length: 844 Molecular Weight: 95587.9 Isoelectric Point: 8.9277 |
| Chromosome | Chromosome/Scaffold: 017731267 Start: 6652 End: 12684 |
| Description | cytokinin oxidase 4 |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA7 | 60 | 252 | 6.6e-27 |
| VYEFAAAVLNPTSPNDIVSLILSANNNSAPVSVAARGQGHSVRGQALTSGGVVINMTALIRNGSRIVVSESPSLGSYADVGGEQRWIDVLRATLERGLTP VSWTDYLYLSVGGTLSNAGISGQTFLYGPQINNVYELDVVTGKGELVTCSSKKVPELFYAVLGGLGQFGIITRARIPLAPAPKRAKWVRMMYS | |||
| Full Sequence |
|---|
| Protein Sequence Length: 844 Download |
| MAENFAVPKY WTTLSLVLGF MMLSATGTSL LLPSLGDIES LLLNDTGSIN STSTDYGHIV 60 YEFAAAVLNP TSPNDIVSLI LSANNNSAPV SVAARGQGHS VRGQALTSGG VVINMTALIR 120 NGSRIVVSES PSLGSYADVG GEQRWIDVLR ATLERGLTPV SWTDYLYLSV GGTLSNAGIS 180 GQTFLYGPQI NNVYELDVVT GKGELVTCSS KKVPELFYAV LGGLGQFGII TRARIPLAPA 240 PKRAKWVRMM YSNFSAFSRD QEHLMAPNGF DYLEGFLLMK QGPLDLSFYP LLDQPRIAAL 300 INRYGIIYYI EAAKYYDDST TKTVDKVVEK TIKGLSFVPE FLFEQDVSYI DFLDRVHTEE 360 ENLRSLGLWE IAHPWLNIFV PKSRISDIDS GVFRNILLKQ NVPTAVSXIY PMNRKRWDGR 420 MSAVIPDEDV FYVVGLLHAS GFNDWQAFDE VNRQLLQFCT DAGIRVKQYL PHYKTREDWK 480 NHFGRKWQSF QDMKVRVSPH VGEDQSLEPS RTPFGRQALP XMVALFTTSV GNPLPXSRNA 540 ILGTTRRQQL SFSRLFSVQI ENPNHITNNL QRSCQFSCGD ILYEHPLQLP TTNANFFCRT 600 GVRIGYGVFA AVKEAKMVLT EEEITRLYRV RKTVMQMLKD RNYLVGDFEI NMSKEQFKDK 660 YGENMKREDL IINKTKRTDT NDQIYVFFPD EPKVGVKTMK TYTNRMKSEN VFRAILVTQQ 720 SLTPFAKTCI SEISGKFHLE VFALTSALEE SYFYPTYKKL APPIIEAELL VNIKEHVLVP 780 EHRVLTNEEK KTLLERYTVK ETQLPRIQVT DPIAKYYGLK RAQVVKIIRP SETAGRYVTY 840 RYVI 900 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam01191 | RNA_pol_Rpb5_C | 6.0e-40 | 771 | 844 | 74 | + RNA polymerase Rpb5, C-terminal domain. The assembly domain of Rpb5. The archaeal equivalent to this domain is subunit H. Subunit H lacks the N-terminal domain. | ||
| PTZ00061 | PTZ00061 | 3.0e-74 | 621 | 844 | 226 | + DNA-directed RNA polymerase; Provisional | ||
| pfam09265 | Cytokin-bind | 4.0e-108 | 241 | 500 | 271 | + Cytokinin dehydrogenase 1, FAD and cytokinin binding. Members of this family adopt an alpha+beta sandwich structure with an antiparallel beta-sheet, in a ferredoxin-like fold. They are predominantly found in plant cytokinin dehydrogenase 1, where they are capable of binding both FAD and cytokinin substrates. The substrate displays a 'plug-into-socket' binding mode that seals the catalytic site and precisely positions the carbon atom undergoing oxidation in close contact with the reactive locus of the flavin. | ||
| PLN03111 | PLN03111 | 2.0e-120 | 617 | 844 | 228 | + DNA-directed RNA polymerase II subunit family protein; Provisional | ||
| PLN02441 | PLN02441 | 0 | 24 | 499 | 485 | + cytokinin dehydrogenase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003677 | DNA binding |
| GO:0003899 | DNA-directed RNA polymerase activity |
| GO:0005634 | nucleus |
| GO:0006351 | transcription, DNA-dependent |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAN80714.1 | 0 | 37 | 501 | 41 | 510 | hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002263754.1 | 0 | 37 | 501 | 41 | 510 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002279519.1 | 0 | 1 | 499 | 1 | 507 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002308300.1 | 0 | 24 | 499 | 27 | 515 | cytokinin oxidase [Populus trichocarpa] |
| RefSeq | XP_002514119.1 | 0 | 1 | 499 | 1 | 517 | gulonolactone oxidase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3s1e_A | 0 | 38 | 499 | 25 | 504 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
| PDB | 3s1c_A | 0 | 38 | 499 | 25 | 504 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
| PDB | 3dq0_A | 0 | 38 | 499 | 25 | 504 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
| PDB | 3c0p_A | 0 | 38 | 499 | 25 | 504 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
| PDB | 3bw7_A | 0 | 38 | 499 | 25 | 504 | A Chain A, Pro427gln Mutant Of Maize Cytokinin OxidaseDEHYDROGENASE COMPLEXED With N6-Isopentenyladenine |
