Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000212502 |
Family | CE8 |
Protein Properties | Length: 372 Molecular Weight: 40973.8 Isoelectric Point: 9.6886 |
Chromosome | Chromosome/Scaffold: 018371124 Start: 8080 End: 11378 |
Description | Pectin lyase-like superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 85 | 366 | 0 |
VAKNPNAGDFTKIQDAIDSLPFINLVRVVIKVHAGIYTEKVNIPPLKSFITIEGAGADKTIVQWGDTAQTPSGPKKQPMGTFNSATFAVNSPYFIARNIT FKNTTPVPKPGAIGKQAVAFRISADTATFWGCSFLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNGLSLFEGCHVHAIAQNIGALTAQGRSSMLEETGFS FVNCKVTGSGALYLGRAWGPFSRVVFAYTYMDDIIIPKGWTVFYGQYKCTGPGARFAGRVSWSRELTDEEAKPFISLTFIDG |
Full Sequence |
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Protein Sequence Length: 372 Download |
MSTLFQHIFY VLILLXLLYS TPSQCHSKGL RPGNPAGNVH LTKNMTRAQL SEQQFMKWVK 60 FVGSLKHSVF KAAKNKLSPS STLHVAKNPN AGDFTKIQDA IDSLPFINLV RVVIKVHAGI 120 YTEKVNIPPL KSFITIEGAG ADKTIVQWGD TAQTPSGPKK QPMGTFNSAT FAVNSPYFIA 180 RNITFKNTTP VPKPGAIGKQ AVAFRISADT ATFWGCSFLG AQDTLYDHLG RHYYKDCYIE 240 GSVDFIFGNG LSLFEGCHVH AIAQNIGALT AQGRSSMLEE TGFSFVNCKV TGSGALYLGR 300 AWGPFSRVVF AYTYMDDIII PKGWTVFYGQ YKCTGPGARF AGRVSWSREL TDEEAKPFIS 360 LTFIDGSEWI KI |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02432 | PLN02432 | 8.0e-108 | 92 | 371 | 290 | + putative pectinesterase | ||
PLN02304 | PLN02304 | 2.0e-109 | 80 | 371 | 310 | + probable pectinesterase | ||
PLN02665 | PLN02665 | 2.0e-112 | 92 | 370 | 291 | + pectinesterase family protein | ||
PLN02634 | PLN02634 | 3.0e-114 | 91 | 370 | 291 | + probable pectinesterase | ||
PLN02682 | PLN02682 | 0 | 42 | 372 | 341 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN63186.1 | 0 | 5 | 372 | 4 | 379 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_001044216.1 | 0 | 26 | 372 | 26 | 384 | Os01g0743200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_197474.1 | 0 | 20 | 372 | 23 | 383 | pectinesterase family protein [Arabidopsis thaliana] |
RefSeq | XP_002330522.1 | 0 | 7 | 372 | 10 | 381 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514210.1 | 0 | 10 | 372 | 11 | 383 | Pectinesterase PPE8B precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 91 | 371 | 16 | 309 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 9.99995e-41 | 85 | 371 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 3uw0_A | 8e-26 | 85 | 365 | 35 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_B | 2e-16 | 85 | 358 | 8 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 2ntq_A | 2e-16 | 85 | 358 | 8 | 328 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |