y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000212712 |
Family | CE8 |
Protein Properties | Length: 343 Molecular Weight: 38261.4 Isoelectric Point: 9.3764 |
Chromosome | Chromosome/Scaffold: 016915321 Start: 6644 End: 8016 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 19 | 284 | 0 |
FLVAKDGSGTNRTVNEALIALARMGHRRTQRIIIYVKSGMYAEKVEIHRDVKNVMLVGDGIDKTIITGSHSVVGDDSTRSSATVGVSGDGFWARDITFEN TAGPQKSPGSGTEAYQDTVYAHSNRQFYRDCQVYGTIDFIFGDAYMVMQNCDIFVRRPMKSQANMITAQGRDNPEENSGIAIHGCRVRPAPEFAGVKGSF RNYLGRPWRKYSRTVFLKTDLDGLIDPKRWTEWRGSYGLSTLFYGEYMNTGPGAATEKRVKWPGFH |
Full Sequence |
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Protein Sequence Length: 343 Download |
MQDGGLLASW NPRTSRADFL VAKDGSGTNR TVNEALIALA RMGHRRTQRI IIYVKSGMYA 60 EKVEIHRDVK NVMLVGDGID KTIITGSHSV VGDDSTRSSA TVGVSGDGFW ARDITFENTA 120 GPQKSPGSGT EAYQDTVYAH SNRQFYRDCQ VYGTIDFIFG DAYMVMQNCD IFVRRPMKSQ 180 ANMITAQGRD NPEENSGIAI HGCRVRPAPE FAGVKGSFRN YLGRPWRKYS RTVFLKTDLD 240 GLIDPKRWTE WRGSYGLSTL FYGEYMNTGP GAATEKRVKW PGFHLVLSKL VLSQLVISFK 300 DRIGFQSLVV CHSGLEYNKD IILWSEAWSP SLCNQKGSLE KGP 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02484 | PLN02484 | 6.0e-104 | 16 | 284 | 284 | + probable pectinesterase/pectinesterase inhibitor | ||
PLN02713 | PLN02713 | 8.0e-107 | 21 | 284 | 278 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 6.0e-120 | 3 | 284 | 296 | + pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-141 | 18 | 284 | 281 | + Pectinesterase. | ||
PLN02916 | PLN02916 | 2.0e-167 | 2 | 284 | 297 | + pectinesterase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN75818.1 | 0 | 2 | 286 | 155 | 453 | hypothetical protein [Vitis vinifera] |
RefSeq | NP_191632.2 | 0 | 2 | 298 | 189 | 499 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q84R10 | 0 | 2 | 298 | 189 | 499 | PME36_ARATH RecName: Full=Probable pectinesterase/pectinesterase inhibitor 36; Includes: RecName: Full=Pectinesterase inhibitor 36; AltName: Full=Pectin methylesterase inhibitor 36; Includes: RecName: Full=Pectinesterase 36; Short=PE 36; AltName: Full=Pectin methylesterase 36; Short=AtPME36; Flags: Precursor |
RefSeq | XP_002274478.1 | 0 | 2 | 286 | 155 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002511680.1 | 0 | 3 | 298 | 143 | 452 | Pectinesterase-2 precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 17 | 286 | 3 | 283 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 18 | 288 | 8 | 289 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 3uw0_A | 0.000000000008 | 31 | 273 | 46 | 336 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
PDB | 1qjv_B | 0.00000000001 | 28 | 276 | 17 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 0.00000000001 | 28 | 276 | 17 | 315 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EH038845 | 281 | 17 | 283 | 0 |
EE076581 | 281 | 16 | 282 | 0 |
EC939603 | 252 | 47 | 284 | 0 |
GH171221 | 233 | 56 | 273 | 0 |
GH171028 | 247 | 17 | 248 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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