Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000218589 |
Family | GH3 |
Protein Properties | Length: 595 Molecular Weight: 64829 Isoelectric Point: 5.1076 |
Chromosome | Chromosome/Scaffold: 020740321 Start: 480 End: 4027 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 79 | 314 | 0 |
LTSRLGIPLIYATDAVHGNGNVYGATIFPHNVGVGATRDADLAQRIGVATALEARACGFHYIIAPCVAVCKDPRWGRCYESYSEDTEIVSKMTSIVSGLQ GQPPQGHPEGYPFIAGSNNTIACAMHFVGEGGTDKGVNEGNAVLSYEDLERIHMKPYLDCISQGVCTIMASYNSWNGDRVHGHXFLLTEILKDKLGFKGI LISDWEGIDQLCEPEGSDYRLCISLAINAGIDMVMV |
Full Sequence |
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Protein Sequence Length: 595 Download |
MAKVAEEHVE ARVKQLLSRM TLKDKVGQMT QIERQVATPA AVRDHSIGSI FSAPGNVPCE 60 KASPSEWADM VDGLQRSALT SRLGIPLIYA TDAVHGNGNV YGATIFPHNV GVGATRDADL 120 AQRIGVATAL EARACGFHYI IAPCVAVCKD PRWGRCYESY SEDTEIVSKM TSIVSGLQGQ 180 PPQGHPEGYP FIAGSNNTIA CAMHFVGEGG TDKGVNEGNA VLSYEDLERI HMKPYLDCIS 240 QGVCTIMASY NSWNGDRVHG HXFLLTEILK DKLGFKGILI SDWEGIDQLC EPEGSDYRLC 300 ISLAINAGID MVMVPFRYEK FIEELIYLVE SREVPMSRID DAVARILRVK FVAGVFEHPF 360 ADKSLQDAVG CKLHRDLARE AVRRSLVLLK NGKDPMKPFL PLDRNAKRIL VAGTHADDLG 420 NQCGGWTATK YGSSGQITIG TTILEAIKMA VGDDTEIIYE KYPSADTLAH QGISFAIVVV 480 GEAPYAEGRG YSSELVIPFN GTDVISSIAD RIPVLAILIS GRPLVLEPSL LEKMDALVAA 540 WLPGTEGEGI VDAIFGDFDF EGRLPVTWFK MVEQLPMHAA DPLYPLGFGM TYNKV 600 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03080 | PLN03080 | 6.0e-37 | 82 | 594 | 586 | + Probable beta-xylosidase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 2.0e-44 | 386 | 592 | 229 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
pfam00933 | Glyco_hydro_3 | 2.0e-82 | 21 | 349 | 333 | + Glycosyl hydrolase family 3 N terminal domain. | ||
COG1472 | BglX | 6.0e-84 | 20 | 451 | 441 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
PRK15098 | PRK15098 | 6.0e-84 | 10 | 592 | 671 | + beta-D-glucoside glucohydrolase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN81230.1 | 0 | 3 | 594 | 6 | 634 | hypothetical protein [Vitis vinifera] |
EMBL | CBI16000.1 | 0 | 20 | 594 | 1 | 581 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002279757.1 | 0 | 3 | 594 | 118 | 715 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313393.1 | 0 | 9 | 591 | 15 | 595 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525596.1 | 0 | 9 | 594 | 13 | 602 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 1 | 593 | 4 | 600 | A Chain A, Crystal Structure Of A Chitinase From Bacteroides Thetaiotaomicron |
PDB | 1iex_A | 0 | 1 | 593 | 4 | 600 | A Chain A, Crystal Structure Of A Chitinase From Bacteroides Thetaiotaomicron |
PDB | 1iew_A | 0 | 1 | 593 | 4 | 600 | A Chain A, Crystal Structure Of A Chitinase From Bacteroides Thetaiotaomicron |
PDB | 1iev_A | 0 | 1 | 593 | 4 | 600 | A Chain A, Crystal Structure Of A Chitinase From Bacteroides Thetaiotaomicron |
PDB | 1ieq_A | 0 | 1 | 593 | 4 | 600 | A Chain A, Crystal Structure Of A Chitinase From Bacteroides Thetaiotaomicron |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DY265467 | 353 | 128 | 477 | 0 |
FC882555 | 290 | 128 | 417 | 0 |
HO784016 | 428 | 48 | 474 | 0 |
EL455042 | 313 | 55 | 367 | 0 |
HO784016 | 41 | 9 | 49 | 0.002 |
Sequence Alignments (This image is cropped. Click for full image.) |
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