| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000221724 |
| Family | GH14 |
| Protein Properties | Length: 268 Molecular Weight: 29906.8 Isoelectric Point: 8.9791 |
| Chromosome | Chromosome/Scaffold: 019629363 Start: 4234 End: 5873 |
| Description | beta-amylase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH14 | 84 | 255 | 0 |
| VMMPVDAFCIDGTGRPRIRKIKALTVALKALKLAGVHGIAVEVWWGIVERFSPLAYDWSLYEGLFKLISDSGLKLHVALSFHSNVNSSSSRKGGVTLPLW IIEIGDQNKHIYYRDQNGFSNDDYLTLGVDHVPLFCGRTALQCYEDFLSGFAKKFESLIGTVIEEIGVGLGC | |||
| Full Sequence |
|---|
| Protein Sequence Length: 268 Download |
| MAVVCKCITS RRSFFCFRAV SFDDKPDRRN LLRNVLTLPV FKKGLFTCCS PSLAGNSILS 60 MEARENSRSS ILSSSLDKRI PIHVMMPVDA FCIDGTGRPR IRKIKALTVA LKALKLAGVH 120 GIAVEVWWGI VERFSPLAYD WSLYEGLFKL ISDSGLKLHV ALSFHSNVNS SSSRKGGVTL 180 PLWIIEIGDQ NKHIYYRDQN GFSNDDYLTL GVDHVPLFCG RTALQCYEDF LSGFAKKFES 240 LIGTVIEEIG VGLGCYCYTR TTSMKPVQ 300 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02705 | PLN02705 | 4.0e-24 | 80 | 254 | 183 | + beta-amylase | ||
| PLN00197 | PLN00197 | 4.0e-32 | 78 | 254 | 177 | + beta-amylase; Provisional | ||
| PLN02803 | PLN02803 | 1.0e-33 | 77 | 254 | 179 | + beta-amylase | ||
| PLN02801 | PLN02801 | 5.0e-34 | 80 | 254 | 176 | + beta-amylase | ||
| PLN02161 | PLN02161 | 4.0e-98 | 3 | 254 | 260 | + beta-amylase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000272 | polysaccharide catabolic process |
| GO:0016161 | beta-amylase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK76508.1 | 0 | 38 | 254 | 2 | 218 | putative beta-amylase [Arabidopsis thaliana] |
| DDBJ | BAH20280.1 | 0 | 29 | 254 | 7 | 232 | AT5G55700 [Arabidopsis thaliana] |
| RefSeq | NP_568829.2 | 0 | 29 | 254 | 40 | 265 | BAM4 (BETA-AMYLASE 4); beta-amylase/ catalytic/ cation binding [Arabidopsis thaliana] |
| RefSeq | XP_001691372.1 | 1.00053e-42 | 81 | 254 | 136 | 311 | beta-amylase [Chlamydomonas reinhardtii] |
| RefSeq | XP_002265698.1 | 0 | 2 | 254 | 6 | 256 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2xgi_A | 1e-37 | 80 | 263 | 10 | 189 | A Chain A, Crystal Structure Of Human Cyclophilin D In Complex With Cyclosporin A |
| PDB | 2xgb_A | 1e-37 | 80 | 263 | 10 | 189 | A Chain A, Crystal Structure Of Human Cyclophilin D In Complex With Cyclosporin A |
| PDB | 2xg9_A | 1e-37 | 80 | 263 | 10 | 189 | A Chain A, Crystal Structure Of Human Cyclophilin D In Complex With Cyclosporin A |
| PDB | 2xfy_A | 1e-37 | 80 | 263 | 10 | 189 | A Chain A, Crystal Structure Of Human Cyclophilin D In Complex With Cyclosporin A |
| PDB | 2xfr_A | 1e-37 | 80 | 263 | 10 | 189 | A Chain A, Crystal Structure Of Human Cyclophilin D In Complex With Cyclosporin A |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EL471812 | 258 | 1 | 254 | 0 |
| DY966243 | 254 | 1 | 248 | 0 |
| EL449477 | 227 | 27 | 253 | 0 |
| EE638423 | 246 | 6 | 248 | 0 |
| EL373639 | 249 | 1 | 246 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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