| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000227552 |
| Family | GT19 |
| Protein Properties | Length: 464 Molecular Weight: 51285.7 Isoelectric Point: 9.5021 |
| Chromosome | Chromosome/Scaffold: 03997712 Start: 31653 End: 34363 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
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| Family | Start | End | Evalue |
| GT19 | 44 | 419 | 0 |
| VFIVSGEVSGDTIGSRLMASLKNLCPVPVRFAGVGGLMMSKQGLKSLFPMEDIAVMGLLELLPHLNRIRVKLLETLEAALLFQPHVVVTVDSKGFSFRLL KQLRARYNQQRVDAPVHFHYVAPSFWAWKGGEARLRGLAGFVDHVLCILPNEEEVCRSNGLAATFVGHPILEDVLELKSKDTSPHEWKIEGNCEDFRRRY AIPAGAKVISLLPGSRLQEVTRMLSIFANAMGLLKVSFPELVTVIHVAPNQHVKNYVAGIANKWPVPSILIPGGSLHQKYDAFSASSVALCASGTVALEM QLARLPCVVAYRAHFLTEWIIRYKAKIPYXSLPNILMDSPIIPEALFQACTPTNLASLILGLIHDDGLREKQIVAA | |||
| Full Sequence |
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| Protein Sequence Length: 464 Download |
| MWFRKLRNVD GENFVGFSRL IRRYASVSST SVIDMAVRDG ELRVFIVSGE VSGDTIGSRL 60 MASLKNLCPV PVRFAGVGGL MMSKQGLKSL FPMEDIAVMG LLELLPHLNR IRVKLLETLE 120 AALLFQPHVV VTVDSKGFSF RLLKQLRARY NQQRVDAPVH FHYVAPSFWA WKGGEARLRG 180 LAGFVDHVLC ILPNEEEVCR SNGLAATFVG HPILEDVLEL KSKDTSPHEW KIEGNCEDFR 240 RRYAIPAGAK VISLLPGSRL QEVTRMLSIF ANAMGLLKVS FPELVTVIHV APNQHVKNYV 300 AGIANKWPVP SILIPGGSLH QKYDAFSASS VALCASGTVA LEMQLARLPC VVAYRAHFLT 360 EWIIRYKAKI PYXSLPNILM DSPIIPEALF QACTPTNLAS LILGLIHDDG LREKQIVAAG 420 KVIRLLCTPA RNSDELVEQH QGGRFPHNTP SVIAATAILH HAKP |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 2.0e-40 | 45 | 435 | 406 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 5.0e-52 | 44 | 415 | 375 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 2.0e-72 | 44 | 439 | 399 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| PRK00025 | lpxB | 4.0e-103 | 42 | 416 | 379 | + lipid-A-disaccharide synthase; Reviewed | ||
| COG0763 | LpxB | 2.0e-103 | 42 | 463 | 422 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 35 | 464 | 1 | 431 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_001140462.1 | 0 | 26 | 463 | 23 | 463 | hypothetical protein LOC100272521 [Zea mays] |
| RefSeq | NP_178535.2 | 0 | 17 | 463 | 14 | 454 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002458499.1 | 0 | 26 | 460 | 3 | 440 | hypothetical protein SORBIDRAFT_03g034785 [Sorghum bicolor] |
| RefSeq | XP_002528957.1 | 0 | 22 | 464 | 26 | 469 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| EX686418 | 258 | 204 | 461 | 0 |
| EY717263 | 259 | 81 | 338 | 0 |
| EE622357 | 257 | 91 | 347 | 0 |
| DC601543 | 205 | 172 | 375 | 0 |
| EY717263 | 53 | 329 | 381 | 0.000009 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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