| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000233076 |
| Family | GH17 |
| Protein Properties | Length: 775 Molecular Weight: 85570 Isoelectric Point: 7.1596 |
| Chromosome | Chromosome/Scaffold: 020843222 Start: 19693 End: 24892 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH17 | 29 | 346 | 0 |
| ACNWGTRSTHPLPPKIVVKLLKDNGFSKVKLFEADAGALQALGRSGIQVMVGIPNDLLAPLASSVTVAEKWVSQNVSSYXSKNGVDIRYVAVGNEPFLTA YKDTFLQTTLPALQNIQAALIKAGLGRQVKVTIPINADVYQTDSGLPSGGDFRXDIRTLMMSIMKFLSDNNGVLTINIYPFLSLQADPDFPKEYAFFNNT AKPVVDGSISYTNVLDANFDTCIAALEKNGFSKLPVIVGEVGWPTDGDPNANIQDARRFNQGLLNRILAGQGTPKRSAAPDIYIFALIDEDAKSVLPGNF ERHWGMFNYDGSLKYPLD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 775 Download |
| MGFRFLLFLL LCVTSEGVVR GVLGAGGLAC NWGTRSTHPL PPKIVVKLLK DNGFSKVKLF 60 EADAGALQAL GRSGIQVMVG IPNDLLAPLA SSVTVAEKWV SQNVSSYXSK NGVDIRYVAV 120 GNEPFLTAYK DTFLQTTLPA LQNIQAALIK AGLGRQVKVT IPINADVYQT DSGLPSGGDF 180 RXDIRTLMMS IMKFLSDNNG VLTINIYPFL SLQADPDFPK EYAFFNNTAK PVVDGSISYT 240 NVLDANFDTC IAALEKNGFS KLPVIVGEVG WPTDGDPNAN IQDARRFNQG LLNRILAGQG 300 TPKRSAAPDI YIFALIDEDA KSVLPGNFER HWGMFNYDGS LKYPLDMGSG KSLVPAKGVK 360 YLPRQWCVMS PDASTSDPNL AQSIDYACSH ADCTSLGNGS SCGMLDAKSN VSYAFNMQGV 420 DRFLFASSKH RPLLLHCRQQ YTEAMAAAFL FSHSGCRGFQ TQAQWTPSHF SAGHSCKSAN 480 FPGKAXXFPX NLRNTSIGCN FVVXGCLQSQ HHPHNQSHSN SIKRHPNAQL VRDLELDLRS 540 SDTVGLTSSN GCQERGGRAG IPHHPLPXDK LVVAVDVDEV LGNFXSALNC FIADRYSSNH 600 SVSEYHVYEF FKIWNCSRDE ADYRVHEFFK SSYFKTGIHP LPGAQETIHK LSDFCDLSVV 660 TSRQNVIKDH TLQWIEQHFS GLFQEIHFGN HWALHGESRP KSEICRSLGA KVLIDDNPRY 720 ALECAEVGIR VLLFDYENSY PWCKTESIDQ HPLVTKVHNW EAVEKQLMTI NSIIS 780 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 2.0e-6 | 260 | 338 | 83 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 3.0e-8 | 365 | 417 | 60 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| pfam06941 | NT5C | 9.0e-11 | 570 | 768 | 212 | + 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C). This family consists of several 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C (NT5C) proteins. 5'(3')-Deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known. | ||
| smart00768 | X8 | 4.0e-12 | 365 | 417 | 55 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 4.0e-73 | 31 | 346 | 318 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016791 | phosphatase activity |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27737.1 | 0 | 27 | 417 | 24 | 414 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_197587.1 | 0 | 4 | 417 | 9 | 427 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
| RefSeq | XP_002277217.1 | 0 | 29 | 417 | 18 | 406 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309443.1 | 0 | 27 | 422 | 1 | 398 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516181.1 | 0 | 1 | 417 | 16 | 431 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ghr_A | 0 | 45 | 346 | 18 | 305 | A Chain A, Structure Of The Chitinase From Jack Bean |
| PDB | 1aq0_B | 0 | 45 | 346 | 18 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 1aq0_A | 0 | 45 | 346 | 18 | 305 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
| PDB | 2cyg_A | 5.60519e-45 | 32 | 335 | 5 | 300 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
| PDB | 3f55_D | 9.94922e-44 | 40 | 347 | 13 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
