Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000238659 |
Family | CBM43 |
Protein Properties | Length: 312 Molecular Weight: 33682.3 Isoelectric Point: 6.2359 |
Chromosome | Chromosome/Scaffold: 007272441 Start: 724 End: 2020 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 226 | 307 | 1.5e-33 |
WCVAKPSVPDPIIQEAMNYACGSGADCASIQPNGPCFNPDSLLAHASYAFNSYWQRTRVAGGTCSFGGTAXLVTIDPSYDGC |
Full Sequence |
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Protein Sequence Length: 312 Download |
METTRNHTRF FIPFLYLTLV ATVSFTQCEA IRSIRFLKGT LPGPTKHSNL FLSAANKLNL 60 INRINFPLEG SKDIQPYGVD SPFTLPPYDS LPPISLPENT PPYYTTPPNT PETPPTTVPT 120 PFVLSPPSIL PIQIPPPSPT SILPGPPESI STPNLPGTVP SPTGFVPTPT IYIPSPPYFE 180 PSPPSLVPNP PSFGFQPSPP VFLPPIVFPP PTMLPSPRRG PTAPLWCVAK PSVPDPIIQE 240 AMNYACGSGA DCASIQPNGP CFNPDSLLAH ASYAFNSYWQ RTRVAGGTCS FGGTAXLVTI 300 DPSYDGCRFD YY |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-26 | 225 | 295 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-42 | 225 | 309 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN78496.1 | 0 | 1 | 311 | 1 | 261 | hypothetical protein [Vitis vinifera] |
EMBL | CBI34142.1 | 0 | 12 | 311 | 5 | 252 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002264966.1 | 0 | 1 | 311 | 1 | 367 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002312230.1 | 0 | 71 | 303 | 3 | 292 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002516415.1 | 0 | 72 | 311 | 4 | 262 | conserved hypothetical protein [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 4e-19 | 223 | 309 | 10 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |