Basic Information | |
---|---|
Species | Malus domestica |
Cazyme ID | MDP0000246856 |
Family | GH10 |
Protein Properties | Length: 498 Molecular Weight: 56270.6 Isoelectric Point: 5.3173 |
Chromosome | Chromosome/Scaffold: 04421018 Start: 3872 End: 8314 |
Description | Glycosyl hydrolase family 10 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH10 | 173 | 453 | 0 |
VSKDFPFGSAIAKTILGNLPYQDWFAKRFNAAVFENELKWYATEPEQGKTNYTIADQMLQFVRANQVIARGHNIFWEDPKYTPQWVRNLTGSDLQSAVNS RIQSLMSKYREEFVHWDVSNEMLHFDFYEQKLGPNATLHFFETAHKSDPLATLFMNDFNVVETCSDVNSTVDSYISRLRELRHGGALMDGIGLEGHFTVP NLPLMRAILDKLATLGLPIWLTEVDISSTLDKETQAIYLEQVLREGFSHPSVNGIMLWTAMHPNGCYQMCLTDNNLQNLPA |
Full Sequence |
---|
Protein Sequence Length: 498 Download |
MSNFYATNPS LLLFSHIAEG PLYDSTAYTE CKLQPEEPLY GGGIIVDRLG NSASWVKIEG 60 AGSALIRASL KTENETNKCV GTVLAKHGCW SFLKGGFVLN SPSQLSTLFF QNADDRDVNI 120 EITSSSLQPF SVQQWSTYQQ YMINTKRKRA VTVHVSDKQG KRLQGLEIDI EQVSKDFPFG 180 SAIAKTILGN LPYQDWFAKR FNAAVFENEL KWYATEPEQG KTNYTIADQM LQFVRANQVI 240 ARGHNIFWED PKYTPQWVRN LTGSDLQSAV NSRIQSLMSK YREEFVHWDV SNEMLHFDFY 300 EQKLGPNATL HFFETAHKSD PLATLFMNDF NVVETCSDVN STVDSYISRL RELRHGGALM 360 DGIGLEGHFT VPNLPLMRAI LDKLATLGLP IWLTEVDISS TLDKETQAIY LEQVLREGFS 420 HPSVNGIMLW TAMHPNGCYQ MCLTDNNLQN LPAGDVVDKL LKEWQTGEIE GQTDEHGSYS 480 FYGFLGEYKA PRGVIRMQ |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3693 | XynA | 3.0e-38 | 175 | 399 | 240 | + Beta-1,4-xylanase [Carbohydrate transport and metabolism] | ||
pfam00331 | Glyco_hydro_10 | 3.0e-59 | 174 | 430 | 273 | + Glycosyl hydrolase family 10. | ||
smart00633 | Glyco_10 | 5.0e-78 | 210 | 457 | 269 | + Glycosyl hydrolase family 10. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF94921.1 | 0 | 23 | 488 | 34 | 528 | Glycosyl hydrolase family 10 protein, expressed [Oryza sativa (japonica cultivar-group)] |
EMBL | CBI37893.1 | 0 | 13 | 490 | 94 | 597 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_195577.2 | 0 | 19 | 489 | 30 | 533 | glycosyl hydrolase family 10 protein [Arabidopsis thaliana] |
RefSeq | XP_002277675.1 | 0 | 19 | 489 | 24 | 520 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002534153.1 | 0 | 50 | 489 | 5 | 444 | Endo-1,4-beta-xylanase A precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v6y_A | 9e-30 | 179 | 430 | 16 | 275 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_B | 6e-28 | 179 | 398 | 16 | 239 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g4f_A | 6e-28 | 179 | 398 | 16 | 239 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3j_A | 6e-28 | 179 | 398 | 16 | 239 | A Chain A, Crystal Structure Of Chimeric Xylanase Between Streptomyces Olivaceoviridis E-86 Fxyn And Cellulomonas Fimi Cex |
PDB | 2g3i_A | 6e-28 | 179 | 398 | 16 | 239 | A Chain A, Structure Of S.Olivaceoviridis Xylanase Q88aR275A MUTANT |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
ES803339 | 253 | 164 | 416 | 0 |
GO498667 | 216 | 252 | 467 | 0 |
DY024035 | 261 | 233 | 490 | 0 |
GR953916 | 292 | 153 | 444 | 0 |
GO498667 | 22 | 462 | 483 | 0.87 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|