| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000247496 |
| Family | GT5 |
| Protein Properties | Length: 795 Molecular Weight: 86929.2 Isoelectric Point: 7.9847 |
| Chromosome | Chromosome/Scaffold: 000399363 Start: 34408 End: 41394 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT5 | 271 | 767 | 0 |
| LVFLGTEVGPWSKTGGLGDVLGGLPPAMAANGHRVMTISPRYDQYKDAWDTEVTVELKVGDKTETVRFFHCYKRGVDRVFVDHPLFLEKVWGKTASKIYG PVAGVDFKDNQLRFSLLCQAALVAPRVLNLNSSKYFSGPYGEEVVFIANDWHTALLPCYLKAIYKPKGIYKTAKVAFCIHNIAYQGRXAFADFALLNLPN EFKSSFDFIDGYNKPVKGRKINWMKAGILESDKVLTVSPYYAEELVSSVEKGVELDNILRKSRIQGIVNGMDVQEWNPVTDKYTTVKYDASTVADAKPLL KEALQAEVGLPVDRDIPVIGFIGRLEEQKGSDILIEAIPHFIKENVQIIVLGTGKKPMEKQLEQLETEYPDKARGIAKFNVPLAHMITAGADFMLVPSRF EPCGLIQLHAMRYGTVPIVASTGGLVDTVKEGFTGFHMGAFNVECEVVDPVDVQAIATTVTRALGSYGTPAFTEIISNCMAQDLSWKGPAKKWEEVL | |||
| Full Sequence |
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| Protein Sequence Length: 795 Download |
| MSKKRGLSLD EKHENMLQIF YDSQDFFLLK ELKKSGSKKD KIGTSTRPDI VGQREQGSGT 60 GDITLCGEHV DQLDVVNAIL DADISSXRLN EITVIFLRRK CKRASHLVTF EACKKQASCQ 120 GLSGSKSFCV KDDSDAVLGF NLVPPNASVK SSRVATTGTS SDHSVDLSTK TLIEEQITKL 180 MATITASSFA STSSHVSYGA VSSGSDPKTG FKKMSFGKQT LTHNGLRALN SVDELRVRIM 240 ANSVARQTRG KTVNSTRKTS GVIVCGSGMN LVFLGTEVGP WSKTGGLGDV LGGLPPAMAA 300 NGHRVMTISP RYDQYKDAWD TEVTVELKVG DKTETVRFFH CYKRGVDRVF VDHPLFLEKV 360 WGKTASKIYG PVAGVDFKDN QLRFSLLCQA ALVAPRVLNL NSSKYFSGPY GEEVVFIAND 420 WHTALLPCYL KAIYKPKGIY KTAKVAFCIH NIAYQGRXAF ADFALLNLPN EFKSSFDFID 480 GYNKPVKGRK INWMKAGILE SDKVLTVSPY YAEELVSSVE KGVELDNILR KSRIQGIVNG 540 MDVQEWNPVT DKYTTVKYDA STVADAKPLL KEALQAEVGL PVDRDIPVIG FIGRLEEQKG 600 SDILIEAIPH FIKENVQIIV LGTGKKPMEK QLEQLETEYP DKARGIAKFN VPLAHMITAG 660 ADFMLVPSRF EPCGLIQLHA MRYGTVPIVA STGGLVDTVK EGFTGFHMGA FNVECEVVDP 720 VDVQAIATTV TRALGSYGTP AFTEIISNCM AQDLSWKGPA KKWEEVLLSL GVANSELGIE 780 GEEIAPLAKE NVATP |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK14099 | PRK14099 | 5.0e-84 | 274 | 770 | 519 | + glycogen synthase; Provisional | ||
| COG0297 | GlgA | 1.0e-110 | 269 | 765 | 515 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
| PRK00654 | glgA | 4.0e-126 | 269 | 766 | 512 | + glycogen synthase; Provisional | ||
| TIGR02095 | glgA | 1.0e-174 | 269 | 770 | 510 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 4.0e-175 | 270 | 767 | 511 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0009058 | biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACB97678.1 | 0 | 181 | 795 | 1 | 615 | granule bound starch synthase Ib precursor [Malus x domestica] |
| GenBank | ACH72975.1 | 0 | 181 | 795 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACM78591.1 | 0 | 181 | 795 | 1 | 615 | granule-bound starch synthase [Nelumbo nucifera] |
| GenBank | ACV72639.1 | 0 | 181 | 795 | 1 | 609 | granule-bound starch synthase 1 [Gossypium hirsutum] |
| RefSeq | XP_002273608.1 | 0 | 181 | 795 | 1 | 614 | PREDICTED: hypothetical protein [Vitis vinifera] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3vuf_A | 0 | 269 | 795 | 10 | 536 | A Chain A, Crystal Structure Of The Hydroxynitrile Lyase From Almond |
| PDB | 3vue_A | 0 | 269 | 795 | 10 | 536 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
| PDB | 3d1j_A | 0 | 269 | 770 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0 | 269 | 770 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0 | 269 | 770 | 1 | 476 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| AJ568414 | 603 | 195 | 795 | 0 |
| HO825853 | 518 | 277 | 794 | 0 |
| HO629148 | 544 | 255 | 795 | 0 |
| CN831271 | 381 | 415 | 795 | 0 |
| HO778340 | 402 | 237 | 636 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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