y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000250651 |
Family | CE8 |
Protein Properties | Length: 446 Molecular Weight: 49049 Isoelectric Point: 8.1088 |
Chromosome | Chromosome/Scaffold: 012107307 Start: 9125 End: 11595 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 130 | 426 | 0 |
FVVSHDGSGDFKLISDAITAAPDHSRQYFXIFVKRGVYYEYVNIGAKKSNLVLVGEGMDNTIISGNRSNGTGWGTSDSATFTVKADGFIAVNIGFVNTAG PYKMQAVALRSQGDRSAFFQCSISGYQDTLLVHDGRQFYRMCKISGTVDFIFGYGTAVFQKCTIISKQNGKGGRNEITAHGRFNQNDPTGFSFQFCNIVH DNSHGTVSVENQTPTYLGRPWGNCSRTVFMQSQLDAVIRPEGWHEWSGDFGLKTLYYGEYMNEGLGSNLSHRVKWPGYHVITDPSVADQFTVAKFIG |
Full Sequence |
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Protein Sequence Length: 446 Download |
MDVVLNVAST MSHMHVEKHD GQNAKIAIPY CADLLGSTAQ VLNWSLSTIH DLKDDVISHM 60 GAWSNTSLSR HKTCMEAFEG TNSILAGGLK QVTTSIHGLL GMLHAHQTAD FVGSIRTSKH 120 IRPWLQRPNF VVSHDGSGDF KLISDAITAA PDHSRQYFXI FVKRGVYYEY VNIGAKKSNL 180 VLVGEGMDNT IISGNRSNGT GWGTSDSATF TVKADGFIAV NIGFVNTAGP YKMQAVALRS 240 QGDRSAFFQC SISGYQDTLL VHDGRQFYRM CKISGTVDFI FGYGTAVFQK CTIISKQNGK 300 GGRNEITAHG RFNQNDPTGF SFQFCNIVHD NSHGTVSVEN QTPTYLGRPW GNCSRTVFMQ 360 SQLDAVIRPE GWHEWSGDFG LKTLYYGEYM NEGLGSNLSH RVKWPGYHVI TDPSVADQFT 420 VAKFIGGNSW LPSTGIPYAP GLLKDR 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02713 | PLN02713 | 4.0e-125 | 131 | 443 | 322 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02301 | PLN02301 | 5.0e-126 | 6 | 442 | 454 | + pectinesterase/pectinesterase inhibitor | ||
PLN02506 | PLN02506 | 2.0e-128 | 25 | 442 | 446 | + putative pectinesterase/pectinesterase inhibitor | ||
pfam01095 | Pectinesterase | 1.0e-156 | 129 | 428 | 300 | + Pectinesterase. | ||
PLN02201 | PLN02201 | 2.0e-161 | 27 | 442 | 447 | + probable pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABK92470.1 | 0 | 1 | 442 | 60 | 526 | unknown [Populus trichocarpa] |
EMBL | CBI29628.1 | 0 | 27 | 442 | 84 | 525 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_189913.3 | 0 | 27 | 443 | 80 | 526 | pectinesterase family protein [Arabidopsis thaliana] |
Swiss-Prot | Q43062 | 0 | 1 | 438 | 64 | 516 | PME_PRUPE RecName: Full=Pectinesterase/pectinesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase inhibitor PPE8B; AltName: Full=Pectin methylesterase inhibitor PPE8B; Includes: RecName: Full=Pectinesterase PPE8B; Short=PE PPE8B; AltName: Full=Pectin methylesterase PPE8B; Flags: Precursor |
RefSeq | XP_002326321.1 | 0 | 1 | 442 | 52 | 518 | predicted protein [Populus trichocarpa] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1xg2_A | 0 | 129 | 442 | 4 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1gq8_A | 0 | 128 | 442 | 7 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_B | 2e-28 | 129 | 433 | 5 | 340 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntq_A | 2e-28 | 129 | 433 | 5 | 340 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 2ntp_B | 2e-28 | 129 | 433 | 5 | 340 | A Chain A, Pectin Methylesterase From Carrot |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EX673765 | 286 | 153 | 438 | 0 |
CO475715 | 292 | 129 | 420 | 0 |
DR937739 | 285 | 158 | 442 | 0 |
CV233766 | 273 | 170 | 442 | 0 |
DT605043 | 272 | 160 | 431 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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