| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000251746 |
| Family | CBM57 |
| Protein Properties | Length: 485 Molecular Weight: 53261 Isoelectric Point: 5.3291 |
| Chromosome | Chromosome/Scaffold: 017553480 Start: 594 End: 4936 |
| Description | Leucine-rich repeat transmembrane protein kinase |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 234 | 403 | 8.8e-29 |
| SIKCGGKQMTGSDGILYETEDSALGPATFSITSTWKWAVSNAGLFSDRKDPSFLVNADAQVTGTDVTPELFQTSRMSPGSLRYYGLGLENGPYTVTLHFA ETVYENHTSQKWESLGRRVFDIYIQGTRRTKDFDISKEAGGVSRAVVRRFNVSVSENYLEIHLFWAGKGT | |||
| Full Sequence |
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| Protein Sequence Length: 485 Download |
| MSALTELSIG VNSFSGPIPK ELGNLKELNV LKIGSNFFSG TLPPELGNLV KLEEMSVGIN 60 SLSGPIPKEL GNLKELTVLS LGTNNFSGTL PPELGNLVKL EYHYIDSCGL SGEIPSTFAK 120 LTNMQTLWAS DSPYSGKIPD FIGNWTQLIE LQFQGNSFEG PIPTNFSQLT SLKSLTDLIE 180 VSGSEFQQFD RPTPKNLAVN NFTFDSSNIA LPGLNCLQRN FPCNQNTPRY ANFSIKCGGK 240 QMTGSDGILY ETEDSALGPA TFSITSTWKW AVSNAGLFSD RKDPSFLVNA DAQVTGTDVT 300 PELFQTSRMS PGSLRYYGLG LENGPYTVTL HFAETVYENH TSQKWESLGR RVFDIYIQGT 360 RRTKDFDISK EAGGVSRAVV RRFNVSVSEN YLEIHLFWAG KGTCCIPKQG DYGPLIAAVH 420 VASDILGLGL RSYTFSYAEL RAATEDFNPS NKLGEGGYGS VYKVKSVLHQ YHVLEVMTRE 480 KRESE |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN00113 | PLN00113 | 2.0e-24 | 1 | 198 | 198 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-26 | 1 | 173 | 173 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 9.0e-30 | 2 | 175 | 174 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| PLN00113 | PLN00113 | 2.0e-31 | 1 | 175 | 175 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
| pfam11721 | Malectin | 3.0e-56 | 232 | 419 | 190 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005515 | protein binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI39026.1 | 0 | 4 | 463 | 106 | 715 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002272404.1 | 0 | 4 | 463 | 61 | 672 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002273016.1 | 0 | 4 | 465 | 106 | 719 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002273016.1 | 3e-28 | 47 | 184 | 101 | 288 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002297945.1 | 0 | 4 | 463 | 102 | 711 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3rj0_A | 4e-23 | 2 | 164 | 391 | 553 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 3rj0_A | 4e-20 | 2 | 172 | 365 | 537 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 3rj0_A | 0.000000000000001 | 1 | 175 | 339 | 516 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 3rj0_A | 0.0000000000002 | 4 | 183 | 293 | 477 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| PDB | 3rj0_A | 0.0000000000004 | 1 | 188 | 265 | 457 | A Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant (M51t) With Increased Ph Optimum |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
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| Hit | Length | Start | End | EValue |
| CO865700 | 196 | 229 | 424 | 0 |
| EL417073 | 231 | 196 | 424 | 0 |
| DY633630 | 184 | 241 | 424 | 0 |
| DT756870 | 238 | 190 | 425 | 0 |
| ES811663 | 232 | 196 | 426 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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