| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000254582 |
| Family | GT19 |
| Protein Properties | Length: 368 Molecular Weight: 41354.5 Isoelectric Point: 8.749 |
| Chromosome | Chromosome/Scaffold: 022482297 Start: 7730 End: 10214 |
| Description | transferases, transferring glycosyl groups |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT19 | 4 | 300 | 0 |
| LKNLFPVPDRFSGVGGLMMTNQGLKSLFPMEDIAVMXLLXLLLXLNMIRVKLQETIEAALRFQPHVVXTVDSKGFSFRLLKQLRGNGVNAPVHFHYVAPS FWAWKGGEARLRGLVQFVDHVLCVLPNEEEVCRSNGLAATFVGHPSLEDVWELNSETSPHEWKMEDTRKLRRFPKEICNACRSQSHFLASWKQITRDHQN AFHLHIRYGIITSVISQASSVALCASGTVALEKQVARLPCVVAYSHFLTELIIRYEAKVPIVSLPNVLMDSPIVPEALFQACTPTNLASLMLLLLRK | |||
| Full Sequence |
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| Protein Sequence Length: 368 Download |
| MASLKNLFPV PDRFSGVGGL MMTNQGLKSL FPMEDIAVMX LLXLLLXLNM IRVKLQETIE 60 AALRFQPHVV XTVDSKGFSF RLLKQLRGNG VNAPVHFHYV APSFWAWKGG EARLRGLVQF 120 VDHVLCVLPN EEEVCRSNGL AATFVGHPSL EDVWELNSET SPHEWKMEDT RKLRRFPKEI 180 CNACRSQSHF LASWKQITRD HQNAFHLHIR YGIITSVISQ ASSVALCASG TVALEKQVAR 240 LPCVVAYSHF LTELIIRYEA KVPIVSLPNV LMDSPIVPEA LFQACTPTNL ASLMLLLLRK 300 RFIRLLCAPA RNLDPLAEQH QGGSFPHNTT SMIAATAILH HAKPLWDVII YVQNVIQMFN 360 ISPMYLLA |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK01021 | lpxB | 7.0e-21 | 3 | 279 | 313 | + lipid-A-disaccharide synthase; Reviewed | ||
| TIGR00215 | lpxB | 3.0e-21 | 13 | 289 | 315 | + lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]. | ||
| pfam02684 | LpxB | 2.0e-36 | 4 | 289 | 320 | + Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. | ||
| PRK00025 | lpxB | 5.0e-42 | 1 | 289 | 329 | + lipid-A-disaccharide synthase; Reviewed | ||
| COG0763 | LpxB | 3.0e-50 | 1 | 289 | 327 | + Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | ||
| Gene Ontology | |
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| GO Term | Description |
| GO:0008915 | lipid-A-disaccharide synthase activity |
| GO:0009245 | lipid A biosynthetic process |
| Annotations - NR Download unfiltered results here | |||||||
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| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI28885.1 | 0 | 1 | 344 | 27 | 431 | unnamed protein product [Vitis vinifera] |
| GenBank | EEC71491.1 | 0 | 1 | 340 | 63 | 464 | hypothetical protein OsI_03760 [Oryza sativa Indica Group] |
| RefSeq | NP_001044267.1 | 0 | 1 | 340 | 63 | 464 | Os01g0752600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_178535.2 | 0 | 1 | 343 | 59 | 454 | transferase, transferring glycosyl groups [Arabidopsis thaliana] |
| RefSeq | XP_002528957.1 | 0 | 1 | 344 | 65 | 469 | Lipid-A-disaccharide synthase, putative [Ricinus communis] |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| JK476206 | 161 | 1 | 157 | 0 |
| DW017982 | 174 | 1 | 168 | 0 |
| GW893403 | 174 | 1 | 168 | 0 |
| FY429474 | 162 | 1 | 157 | 0 |
| EV196281 | 177 | 1 | 172 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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