| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000258316 |
| Family | CE8 |
| Protein Properties | Length: 253 Molecular Weight: 28652.5 Isoelectric Point: 8.2386 |
| Chromosome | Chromosome/Scaffold: 009282271 Start: 154 End: 2455 |
| Description | Plant invertase/pectin methylesterase inhibitor superfamily |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CE8 | 62 | 237 | 0 |
| SAGFEGYQDTLYTHSRKQLYRECDIYGTVDFIFGDATVVLQNCNIYPRQPNKGQSNVITAQCRMYPDFKTGISIHNCTIEPTPELASSNYKVKTYLGRPW KKYSRTIYIQXSMGSLIDPAGWLAWSGDFALSTLYYAEYNNTGLGSNNTTRVQWPGYHVINARDAANFTISNFLEG | |||
| Full Sequence |
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| Protein Sequence Length: 253 Download |
| MXTCKTCNPL ELGLQAVVKL SRLEDNFXAN LKTYRIVKVI VGLRTCQSRR HWHCCEEGXI 60 CSAGFEGYQD TLYTHSRKQL YRECDIYGTV DFIFGDATVV LQNCNIYPRQ PNKGQSNVIT 120 AQCRMYPDFK TGISIHNCTI EPTPELASSN YKVKTYLGRP WKKYSRTIYI QXSMGSLIDP 180 AGWLAWSGDF ALSTLYYAEY NNTGLGSNNT TRVQWPGYHV INARDAANFT ISNFLEGDNW 240 LPNTGVPYTG GLI |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02468 | PLN02468 | 7.0e-85 | 61 | 252 | 192 | + putative pectinesterase/pectinesterase inhibitor | ||
| PLN02916 | PLN02916 | 2.0e-85 | 61 | 252 | 193 | + pectinesterase family protein | ||
| PLN03043 | PLN03043 | 7.0e-92 | 61 | 253 | 193 | + Probable pectinesterase/pectinesterase inhibitor; Provisional | ||
| pfam01095 | Pectinesterase | 1.0e-104 | 61 | 238 | 179 | + Pectinesterase. | ||
| PLN02713 | PLN02713 | 1.0e-122 | 61 | 253 | 193 | + Probable pectinesterase/pectinesterase inhibitor | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAL24207.1 | 0 | 62 | 253 | 153 | 344 | At2g47550/T30B22.15 [Arabidopsis thaliana] |
| GenBank | AAO11616.1 | 0 | 62 | 253 | 153 | 344 | At2g47550/T30B22.15 [Arabidopsis thaliana] |
| DDBJ | BAF42040.1 | 0 | 62 | 253 | 373 | 564 | pectin methylesterase 3 [Pyrus communis] |
| EMBL | CBI36882.1 | 0 | 41 | 253 | 362 | 566 | unnamed protein product [Vitis vinifera] |
| RefSeq | NP_566103.1 | 0 | 62 | 253 | 368 | 559 | pectinesterase family protein [Arabidopsis thaliana] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 0 | 65 | 252 | 127 | 315 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 0 | 68 | 252 | 134 | 319 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1qjv_B | 0.000000005 | 67 | 188 | 151 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 1qjv_A | 0.000000005 | 67 | 188 | 151 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| PDB | 2ntq_B | 0.000000005 | 67 | 188 | 151 | 284 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| DT463953 | 192 | 62 | 253 | 0 |
| DT465599 | 192 | 62 | 253 | 0 |
| CX701458 | 192 | 62 | 253 | 0 |
| FS349507 | 189 | 65 | 253 | 0 |
| FK024026 | 192 | 62 | 253 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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