Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000258920 |
Family | CBM43 |
Protein Properties | Length: 207 Molecular Weight: 21224.9 Isoelectric Point: 4.1171 |
Chromosome | Chromosome/Scaffold: 008938439 Start: 31766 End: 34309 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 47 | 128 | 1.4e-34 |
WCVARSDASAQALQTALDYACAAGADCSPIQSDGLCYLPNTIQAHASYAFNSYYQRQAKAPGSCGFSGTATIAQTDPSYGSC |
Full Sequence |
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Protein Sequence Length: 207 Download |
MAPLSLSNQH PLISFLFFLT PIVMVVGMLG VFGVDGANSP TSSSTTWCVA RSDASAQALQ 60 TALDYACAAG ADCSPIQSDG LCYLPNTIQA HASYAFNSYY QRQAKAPGSC GFSGTATIAQ 120 TDPSYGSCDY PSSTSAAGGT TSPSTPPTVP NPQTPPSTFA PPFTASTGGF TPGSTPMIPD 180 DNSKASLDSM SPTILMPISL VLVLLFT |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 2.0e-23 | 46 | 117 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-39 | 46 | 130 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU17645.1 | 0 | 20 | 207 | 7 | 191 | unknown [Glycine max] |
RefSeq | NP_001148424.1 | 8.00141e-43 | 47 | 202 | 30 | 186 | glucan endo-1,3-beta-glucosidase 4 [Zea mays] |
RefSeq | NP_193096.5 | 0 | 8 | 206 | 25 | 223 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002267551.1 | 0 | 31 | 207 | 34 | 213 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002518089.1 | 0 | 16 | 133 | 7 | 113 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-24 | 46 | 135 | 12 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |