Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000268143 |
Family | GH3 |
Protein Properties | Length: 580 Molecular Weight: 64066.8 Isoelectric Point: 6.9236 |
Chromosome | Chromosome/Scaffold: 001989227 Start: 715 End: 7295 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 2 | 86 | 1.1e-25 |
AETFLKPFEMCIKDGDVSSVMCSYNRVNGIPTCADPKLLTHTIRGEWDLHGYIVADCDSLEVMVDHHKWLSDTNEDAAAQALKAG |
Full Sequence |
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Protein Sequence Length: 580 Download |
MAETFLKPFE MCIKDGDVSS VMCSYNRVNG IPTCADPKLL THTIRGEWDL HGYIVADCDS 60 LEVMVDHHKW LSDTNEDAAA QALKAGHVFE WLDVQEVTFS GGVHGAVPSD XVDARSXXVL 120 RACCEWSXSF HRRIGCPSRM DLDCGDYYPN FTQSSVXQGK VKEVEIDRSL KNLYVVLMRL 180 GFFDGXPTFK SLGKKDVCSK QHIELATXAA REGIVLLKNV NETLPLKSKK IKKLAIVGPH 240 ANATAAMIGN YAGIPCQFTS PLDAFSSYGE VKYEMGCDGV ACAXXSLIFP AMRAAKHADA 300 TIIFAGLDLS VEAESLDRVD LLLPGYQTQF INQVAQVSKG PVILVIMSAG GVDISFAKQN 360 DNINAILWAG YPGEEGGRAI ADVAFGHYNP GGRLPLXWYE AGYVDMLPMT SMQLRPIDSL 420 GYPGRTYKFY NGSTVXPFGY GLSYTQFNYT LRSAKRSLDI NLRKSQHCRD IEYKDHEYKP 480 PCPXVLIDDL QCNHELGFGV EVKNVGKRDG SEVIIVYSKP PNGIAATHAK XVIGFXRVFV 540 KAGKSETVNF VFNACKSLGL VNYNAYNLLT SGRHTIFDWR |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1472 | BglX | 3.0e-15 | 1 | 242 | 244 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 2.0e-18 | 1 | 122 | 131 | + Glycosyl hydrolase family 3 N terminal domain. | ||
PRK15098 | PRK15098 | 1.0e-50 | 1 | 550 | 590 | + beta-D-glucoside glucohydrolase; Provisional | ||
pfam01915 | Glyco_hydro_3_C | 3.0e-58 | 214 | 445 | 238 | + Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933. | ||
PLN03080 | PLN03080 | 5.0e-158 | 1 | 577 | 593 | + Probable beta-xylosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI25989.1 | 0 | 1 | 576 | 241 | 726 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002274591.1 | 0 | 1 | 576 | 265 | 785 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274619.1 | 0 | 1 | 577 | 266 | 787 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002274651.1 | 0 | 1 | 576 | 269 | 789 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002519718.1 | 0 | 1 | 577 | 266 | 787 | Beta-glucosidase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u48_B | 5e-32 | 1 | 564 | 205 | 707 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u48_A | 5e-32 | 1 | 564 | 205 | 707 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u4a_B | 2e-31 | 1 | 564 | 205 | 707 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 3u4a_A | 2e-31 | 1 | 564 | 205 | 707 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
PDB | 4iih_B | 6e-19 | 3 | 450 | 208 | 641 | A Chain A, Structural Insights Into The Processivity Of Endopolygalacturonase I From Aspergillus Niger |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
AJ803048 | 256 | 236 | 491 | 0 |
GW617743 | 221 | 213 | 433 | 0 |
DT760212 | 238 | 140 | 375 | 0 |
CO472941 | 294 | 162 | 451 | 0 |
EX396067 | 295 | 160 | 450 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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