Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000270038 |
Family | GT14 |
Protein Properties | Length: 425 Molecular Weight: 47867.3 Isoelectric Point: 8.0655 |
Chromosome | Chromosome/Scaffold: 0009561095 Start: 11944 End: 13817 |
Description | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT14 | 69 | 313 | 0 |
FAYWICGTKGESEKILRLLKAIYHPRNHYLLQLDSGSSDYDRGQLALSVQSERVFRSFGNVYVVGKSYXLNQMGSSALAATLNAAALLLKLSADWDWFIT LSASDYPLMNQDDLLHAFTLLPRNTNFIHFTNKTGWKEHMDRIVDDPSLYLQHVAPLLYIVENRTMPDAFKIFGGSPWTILTRDFLNYCVKGWDNFPRKL LMYLSNVPYPLESYFHTIICSLPEFRNSLVNNDLRYIIWDTNALG |
Full Sequence |
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Protein Sequence Length: 425 Download |
MVLKLPPMRT PNTSSWCFGY RLWILALSVT LVLLGAISRS SHNVFSGYGN KNQLSMRVPL 60 KGNGNPPVFA YWICGTKGES EKILRLLKAI YHPRNHYLLQ LDSGSSDYDR GQLALSVQSE 120 RVFRSFGNVY VVGKSYXLNQ MGSSALAATL NAAALLLKLS ADWDWFITLS ASDYPLMNQD 180 DLLHAFTLLP RNTNFIHFTN KTGWKEHMDR IVDDPSLYLQ HVAPLLYIVE NRTMPDAFKI 240 FGGSPWTILT RDFLNYCVKG WDNFPRKLLM YLSNVPYPLE SYFHTIICSL PEFRNSLVNN 300 DLRYIIWDTN ALGEAQVLNI SHYDQXLASG AAFARPFRAD DDLVLNKIDE SVLNRTSGGL 360 VPGEWCPGIG RSKSLENSAA GQEELCPSWG NINHVTPGPR GVSLREFLPK LAVEGRFTIS 420 HCQEQ |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02485 | Branch | 5.0e-50 | 69 | 308 | 240 | + Core-2/I-Branching enzyme. This is a family of two different beta-1,6-N-acetylglucosaminyltransferase enzymes, I-branching enzyme and core-2 branching enzyme . I-branching enzyme is responsible for the production of the blood group I-antigen during embryonic development. Core-2 branching enzyme forms crucial side-chain branches in O-glycans. | ||
PLN03183 | PLN03183 | 1.0e-93 | 67 | 423 | 360 | + acetylglucosaminyltransferase family protein; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0008375 | acetylglucosaminyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAX33324.1 | 0 | 54 | 422 | 50 | 413 | secondary cell wall-related glycosyltransferase family 14 [Populus tremula x Populus tremuloides] |
GenBank | ABR16364.1 | 0 | 58 | 425 | 64 | 423 | unknown [Picea sitchensis] |
RefSeq | XP_002284096.1 | 0 | 46 | 423 | 27 | 401 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002310932.1 | 0 | 29 | 422 | 1 | 392 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515811.1 | 0 | 29 | 422 | 1 | 401 | acetylglucosaminyltransferase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3otk_D | 0.00000003 | 81 | 333 | 97 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_C | 0.00000003 | 81 | 333 | 97 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_B | 0.00000003 | 81 | 333 | 97 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3otk_A | 0.00000003 | 81 | 333 | 97 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 2gam_D | 0.00000009 | 81 | 333 | 97 | 332 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
GO532143 | 213 | 206 | 418 | 0 |
ES809218 | 313 | 56 | 366 | 0 |
GR710096 | 258 | 51 | 306 | 0 |
CO084020 | 272 | 59 | 328 | 0 |
DR943045 | 276 | 57 | 330 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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