PlantCAZyme

CAZyme Information

Basic Information
Species	Malus domestica
Cazyme ID	MDP0000272685
Family	GH3
Protein Properties	Length: 697 Molecular Weight: 76675.7 Isoelectric Point: 6.1612
Chromosome	Chromosome/Scaffold: 005175231 Start: 18296 End: 21460
Description	Glycosyl hydrolase family protein
View CDS

External Links
NCBI Taxonomy
CAZyDB

External Links

NCBI Taxonomy

CAZyDB

Signature Domain Download full data set without filtering

Family	Start	End	Evalue
GH3	89	344	0
ATRLGIPMIYGIDAVHGHNNVFKATIFPHNVGLGATRQPPLLALALVVFIWVFLYDNFRDRELIRRIGAATALEVRATGIQYTFAPCVAVCRDPRWGRCY ESYSEDPSIVKQMSELVIGLQGEIPAGSPKGVPYVGGPDKVAASAKHFVGDGGTTNGINENNTVIDWQGLFEIHMPGYIESIAKGVSTVMVSYSSWNGVK MHANYELITKYLKDTLNFKGVVISDWLGVDKISNPPMTNYSNSLLLSIQAGLDMIM

Full Sequence
Protein Sequence Length: 697 Download
MTKGEEEDMK YKNPKYSIND RVEDLLARMT LEEKIGQMAQ VDRGNITAEV MKEYNIGSIL 60 SGGESVPRTQ ATTQDWVDMI NKFQNWSLAT RLGIPMIYGI DAVHGHNNVF KATIFPHNVG 120 LGATRQPPLL ALALVVFIWV FLYDNFRDRE LIRRIGAATA LEVRATGIQY TFAPCVAVCR 180 DPRWGRCYES YSEDPSIVKQ MSELVIGLQG EIPAGSPKGV PYVGGPDKVA ASAKHFVGDG 240 GTTNGINENN TVIDWQGLFE IHMPGYIESI AKGVSTVMVS YSSWNGVKMH ANYELITKYL 300 KDTLNFKGVV ISDWLGVDKI SNPPMTNYSN SLLLSIQAGL DMIMIPHNYT FFVKFLTNHV 360 NENRIPMSRI DDAVRRILSL KFMMGLFEKP MXSYEYIPWL GCQAHRDLGR EAVRKSLVLL 420 KNGKTPNDAP MLPLPRTAKR ILVAGTHANN LGYQCGGWSL TWQGVSGNNH TVGTTILGAI 480 TKAVNETTEI FYSVNPDLEL VTLGKFDYAV VAVGELPYAE TKGDDSNLTM IEPGPSVIKN 540 ICGAVKCVVI VVSGRPIVME PYISSIDALV AAWLPGTEGQ GIADVLYGDY GFTGKLARTW 600 FKRVDQLPMN VGDKDYDPLF PYGFGLTTQP NANSTSANSI LVKRVVIVVS WSPVVVEPLT 660 SPVDALAAAW LPELKEDQAI TDALXGDYGL TGKLPMT

Full Sequence

Protein Sequence Length: 697 Download

MTKGEEEDMK YKNPKYSIND RVEDLLARMT LEEKIGQMAQ VDRGNITAEV MKEYNIGSIL    60
SGGESVPRTQ ATTQDWVDMI NKFQNWSLAT RLGIPMIYGI DAVHGHNNVF KATIFPHNVG    120
LGATRQPPLL ALALVVFIWV FLYDNFRDRE LIRRIGAATA LEVRATGIQY TFAPCVAVCR    180
DPRWGRCYES YSEDPSIVKQ MSELVIGLQG EIPAGSPKGV PYVGGPDKVA ASAKHFVGDG    240
GTTNGINENN TVIDWQGLFE IHMPGYIESI AKGVSTVMVS YSSWNGVKMH ANYELITKYL    300
KDTLNFKGVV ISDWLGVDKI SNPPMTNYSN SLLLSIQAGL DMIMIPHNYT FFVKFLTNHV    360
NENRIPMSRI DDAVRRILSL KFMMGLFEKP MXSYEYIPWL GCQAHRDLGR EAVRKSLVLL    420
KNGKTPNDAP MLPLPRTAKR ILVAGTHANN LGYQCGGWSL TWQGVSGNNH TVGTTILGAI    480
TKAVNETTEI FYSVNPDLEL VTLGKFDYAV VAVGELPYAE TKGDDSNLTM IEPGPSVIKN    540
ICGAVKCVVI VVSGRPIVME PYISSIDALV AAWLPGTEGQ GIADVLYGDY GFTGKLARTW    600
FKRVDQLPMN VGDKDYDPLF PYGFGLTTQP NANSTSANSI LVKRVVIVVS WSPVVVEPLT    660
SPVDALAAAW LPELKEDQAI TDALXGDYGL TGKLPMT 

Functional Domains Download unfiltered results here

Cdd ID	Domain	E-Value	Start	End	Length	Domain Description
pfam01915	Glyco_hydro_3_C	2.0e-49	417	627	229	+ Glycosyl hydrolase family 3 C-terminal domain. This domain is involved in catalysis and may be involved in binding beta-glucan. This domain is found associated with pfam00933.
PRK15098	PRK15098	2.0e-75	22	627	681	+ beta-D-glucoside glucohydrolase; Provisional
COG1472	BglX	5.0e-80	29	485	468	+ Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism]
pfam00933	Glyco_hydro_3	3.0e-84	30	380	355	+ Glycosyl hydrolase family 3 N terminal domain.

Gene Ontology
GO Term	Description
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process

Annotations - NR Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
EMBL	CBI39076.1	0	9	630	26	632	unnamed protein product [Vitis vinifera]
EMBL	CBI39076.1	0.0000003	611	697	515	601	unnamed protein product [Vitis vinifera]
RefSeq	XP_002266589.1	0	4	630	21	624	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002266589.1	0.00000002	642	697	539	593	PREDICTED: hypothetical protein [Vitis vinifera]
RefSeq	XP_002266675.1	0	4	630	21	624	PREDICTED: hypothetical protein [Vitis vinifera]

Annotations - PDB Download unfiltered results here
Source	Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
PDB	1x39_A	0	11	628	5	599	A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1
PDB	1x39_A	0.000000001	629	697	503	570	A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1
PDB	1x38_A	0	11	628	5	599	A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1
PDB	1x38_A	0.000000001	629	697	503	570	A Chain A, Crystal Structure Of The Nasturtium Seedling Xyloglucanase Isoform Nxg1
PDB	1lq2_A	0	11	628	5	599	A Chain A, Crystal Structure Of Barley Beta-D-Glucan Glucohydrolase Isoenzyme Exo1 In Complex With Gluco-Phenylimidazole

Hydropathy

EST Download unfiltered results here

Hit

Length

Start

End

EValue

HO784016

450

506

FN998758

350

403

FN998735

338

391

FN998511

338

391

HO784016

0.0000006

Orthologous Group
Species	ID
Aquilegia coerulea	Aquca_009_00600.1	Aquca_009_00598.3	Aquca_009_00598.2	Aquca_009_00598.1	Aquca_009_00603.1
	Aquca_009_00596.1	Aquca_009_00601.1	Aquca_009_00602.1	Aquca_009_00735.2	Aquca_009_00735.1
	Aquca_009_00596.4	Aquca_009_00596.3	Aquca_009_00596.2	Aquca_009_00596.5	Aquca_009_00735.3
	Aquca_009_00601.2
Arabidopsis lyrata	485082	489005	487274	489003	485079
	323329	486769	485080
Arabidopsis thaliana	AT5G20950.2	AT5G20950.1	AT5G04885.1	AT5G20940.1	AT3G47000.1
	AT3G47010.2	AT3G47010.1	AT3G47050.2	AT3G47050.1	AT3G62710.1
	AT3G47040.1	AT3G47040.2
Brachypodium distachyon	Bradi1g08550.2	Bradi1g08570.2	Bradi1g08570.1	Bradi2g51280.1	Bradi1g08560.1
	Bradi1g08580.1	Bradi2g23720.1
Brassica rapa	Bra005825	Bra020139	Bra009417	Bra003508	Bra018177
	Bra014397	Bra002346	Bra018172	Bra006587	Bra018171
	Bra033795
Carica papaya	evm.model.supercontig_103.89	evm.model.supercontig_51.147	evm.model.supercontig_103.88	evm.model.supercontig_51.146	evm.model.supercontig_103.83
	evm.model.supercontig_112.57	evm.model.supercontig_103.85
Capsella rubella	Carubv10016857m	Carubv10000466m	Carubv10000396m	Carubv10002603m	Carubv10016864m
	Carubv10019506m	Carubv10016871m	Carubv10018993m
Citrus clementina	Ciclev10019305m	Ciclev10030270m	Ciclev10018271m	Ciclev10017853m	Ciclev10015118m
	Ciclev10014767m	Ciclev10014537m	Ciclev10028019m	Ciclev10028018m	Ciclev10028048m
Citrus sinensis	orange1.1g038523m	orange1.1g036635m	orange1.1g006872m	orange1.1g013915m	orange1.1g013894m
	orange1.1g013886m	orange1.1g040637m
Cucumis sativus	Cucsa.340290.1	Cucsa.282900.1	Cucsa.111760.1	Cucsa.340300.1	Cucsa.356980.1
	Cucsa.146890.1	Cucsa.146880.2	Cucsa.146880.1	Cucsa.146890.3	Cucsa.146890.2
	Cucsa.340290.2	Cucsa.109190.1
Eucalyptus grandis	Eucgr.J00606.1	Eucgr.J00608.1	Eucgr.A02118.1	Eucgr.J00609.1	Eucgr.G02657.1
	Eucgr.J00604.1	Eucgr.J00603.1	Eucgr.J00605.1	Eucgr.B02287.1	Eucgr.B02276.1
	Eucgr.A02116.1	Eucgr.J00607.1
Fragaria vesca	mrna03614.1-v1.0-hybrid	mrna07689.1-v1.0-hybrid	mrna07690.1-v1.0-hybrid	mrna07985.1-v1.0-hybrid	mrna22463.1-v1.0-hybrid
	mrna00353.1-v1.0-hybrid	mrna22192.1-v1.0-hybrid
Glycine max	Glyma19g29050.1	Glyma10g15980.1	Glyma17g24410.1	Glyma15g13620.1	Glyma09g02731.2
	Glyma09g02731.1	Glyma02g43990.2	Glyma02g43990.1	Glyma14g04940.2	Glyma14g04940.1
	Glyma02g33550.1	Glyma16g04330.1	Glyma19g29060.1	Glyma16g04340.1	Glyma02g39010.1
	Glyma11g22940.2	Glyma11g22940.1	Glyma02g43990.3	Glyma14g37070.1	Glyma18g07260.2
Gossypium raimondii	Gorai.009G081100.1	Gorai.006G118100.3	Gorai.006G118100.2	Gorai.006G118100.1	Gorai.009G301800.2
	Gorai.009G301800.1	Gorai.013G114800.5	Gorai.013G114800.4	Gorai.013G114800.3	Gorai.013G114800.2
	Gorai.013G114800.11	Gorai.013G114800.10	Gorai.013G114800.1	Gorai.007G260100.2	Gorai.007G260100.1
	Gorai.007G260000.1	Gorai.013G260700.3	Gorai.013G260700.2	Gorai.013G260700.1	Gorai.002G219500.1
	Gorai.009G093600.1	Gorai.013G114800.6	Gorai.013G114800.8	Gorai.013G114800.7	Gorai.013G260700.4
	Gorai.013G114800.9	Gorai.013G114800.12	Gorai.001G127700.1	Gorai.001G127600.1
Linum usitatissimum	Lus10001151	Lus10013646	Lus10010656	Lus10033393	Lus10005706
	Lus10010657	Lus10005871	Lus10001200.86.321	Lus10013390	Lus10022413
	Lus10018102	Lus10008432	Lus10023604	Lus10013388	Lus10008434
	Lus10043457	Lus10034848	Lus10013647
Malus domestica	MDP0000765919	MDP0000196385	MDP0000062066	MDP0000194876	MDP0000119414
	MDP0000140449	MDP0000218589	MDP0000191983	MDP0000171861	MDP0000153761
	MDP0000121876	MDP0000154790	MDP0000190086	MDP0000243329	MDP0000552093
	MDP0000163344	MDP0000119413	MDP0000235035	MDP0000302379
Manihot esculenta	cassava4.1_033854m	cassava4.1_024895m	cassava4.1_030227m	cassava4.1_003201m	cassava4.1_003199m
	cassava4.1_003582m	cassava4.1_024363m
Medicago truncatula	Medtr3g079750.1	Medtr2g030000.1	Medtr7g086030.1	Medtr5g069800.1	Medtr7g086010.1
	Medtr5g069740.1	AC235673_11.1
Mimulus guttatus	mgv1a002814m	mgv1a003439m	mgv1a002476m	mgv1a002879m	mgv1a002782m
	mgv1a002845m	mgv1a019891m	mgv1a020896m	mgv1a003116m	mgv1a003210m
Oryza sativa	LOC_Os03g53800.5	LOC_Os03g53800.4	LOC_Os03g53800.3	LOC_Os03g53800.2	LOC_Os03g53800.1
	LOC_Os03g53860.5	LOC_Os03g53860.4	LOC_Os03g53860.3	LOC_Os03g53860.2	LOC_Os03g53860.1
	LOC_Os02g03870.1	LOC_Os01g56510.5	LOC_Os01g56510.4	LOC_Os01g56510.3	LOC_Os01g56510.2
	LOC_Os01g56510.1	LOC_Os03g53790.1	LOC_Os05g37700.1	LOC_Os05g37700.2
Panicum virgatum	Pavirv00044084m	Pavirv00044083m	Pavirv00044082m	Pavirv00057654m	Pavirv00000883m
	Pavirv00015776m	Pavirv00021236m	Pavirv00021235m	Pavirv00001262m	Pavirv00040732m
	Pavirv00029174m	Pavirv00022627m	Pavirv00015364m	Pavirv00023155m	Pavirv00060136m
	Pavirv00060135m	Pavirv00023191m	Pavirv00015460m	Pavirv00012515m	Pavirv00047960m
	Pavirv00013835m
Physcomitrella patens	Pp1s1821_1V6.1	Pp1s217_8V6.1	Pp1s309_65V6.2	Pp1s309_65V6.1	Pp1s49_195V6.1
Phaseolus vulgaris	Phvul.007G250300.1	Phvul.004G050500.1	Phvul.006G128800.1	Phvul.008G210100.1	Phvul.001G112700.1
	Phvul.006G065600.1	Phvul.001G112600.2	Phvul.001G112600.1
Picea abies	MA_10437038g0010	MA_56211g0010	MA_41345g0010	MA_10429527g0010	MA_10435456g0010
	MA_10247978g0010	MA_10435456g0020	MA_8496645g0010	MA_10435456g0030
Populus trichocarpa	Potri.019G037400.1	Potri.013G055600.2	Potri.013G055600.1	Potri.008G013500.1	Potri.019G037400.2
	Potri.008G013700.1	Potri.009G153900.3	Potri.009G153900.1	Potri.009G153900.2	Potri.009G042800.2
	Potri.009G042800.1	Potri.009G154000.1	Potri.009G154800.1	Potri.009G153900.4	Potri.005G059200.1
Prunus persica	ppa014605m	ppa020836m	ppa014607m	ppa002559m	ppa015239m
	ppa002894m	ppa003012m	ppa025914m	ppa014895m	ppa026252m
	ppa006354m	ppa018735m	ppa022452m	ppa021476m
Ricinus communis	43378.m000013	29976.m000489	30072.m000981	29852.m002020	29976.m000487
	29681.m001297	34040.m000025
Setaria italica	Si034693m	Si034691m	Si034690m	Si034605m	Si034551m
	Si034710m	Si034709m	Si034708m	Si034705m	Si034703m
	Si020199m	Si000575m	Si020102m	Si019228m	Si019105m
	Si004089m	Si040033m	Si024819m	Si021490m	Si035613m
Selaginella moellendorffii	157260	74114
Sorghum bicolor	Sb01g008040.3	Sb01g008040.2	Sb01g008040.1	Sb01g008030.5	Sb01g008030.4
	Sb01g008030.3	Sb01g008030.2	Sb01g008030.1	Sb03g035970.1	Sb04g002570.1
	Sb04g002560.1	Sb04g002580.1	Sb01g008050.1	Sb09g022050.2	Sb09g022050.1
Thellungiella halophila	Thhalv10012965m	Thhalv10012964m	Thhalv10012963m	Thhalv10012900m	Thhalv10015493m
	Thhalv10010277m	Thhalv10010212m	Thhalv10005832m	Thhalv10010213m	Thhalv10010219m
Vitis vinifera	GSVIVT01012185001	GSVIVT01037543001	GSVIVT01023452001	GSVIVT01023455001	GSVIVT01022483001
	GSVIVT01034613001	GSVIVT01037542001	GSVIVT01024793001	GSVIVT01037547001	GSVIVT01037546001
Zea mays	AC197578.4_FGT001

Orthologous Group

Species

Aquilegia coerulea