| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000276358 |
| Family | GT5 |
| Protein Properties | Length: 311 Molecular Weight: 35431.5 Isoelectric Point: 7.4636 |
| Chromosome | Chromosome/Scaffold: 005467149 Start: 3921 End: 5922 |
| Description | starch synthase 4 |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 94 | 310 | 0 |
| LVHVTAEMAPIAKVGGLADVVTGLARASLSRGHTVHVMLPFYECIQKHQINDLSLVATYNSFHHGNWIPTNAYTGIVSGIPVILIDPSHHFFKGHHVYGG SYNELEAYLFFSRACLEWMQATGTQPDIIHVHEWQTGALPLLYWDMYHYLSLKKPRVVLTIHNMEHYGECRQEQLSMCGLDGSLYANFEKAIDDRTVGHN PERLSLLKGGIVYSNAV | |||
| Full Sequence |
|---|
| Protein Sequence Length: 311 Download |
| METTAIAIAG DLFSCFETRS SSLCHPPPTS TRWRWRRRRQ KQKQSCSCQF RIPQEFAWPS 60 PDDDIPFWKK PFPSWDVNLE PPSQVIKDSK LMHLVHVTAE MAPIAKVGGL ADVVTGLARA 120 SLSRGHTVHV MLPFYECIQK HQINDLSLVA TYNSFHHGNW IPTNAYTGIV SGIPVILIDP 180 SHHFFKGHHV YGGSYNELEA YLFFSRACLE WMQATGTQPD IIHVHEWQTG ALPLLYWDMY 240 HYLSLKKPRV VLTIHNMEHY GECRQEQLSM CGLDGSLYAN FEKAIDDRTV GHNPERLSLL 300 KGGIVYSNAV V 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK00654 | glgA | 8.0e-49 | 92 | 310 | 223 | + glycogen synthase; Provisional | ||
| pfam08323 | Glyco_transf_5 | 7.0e-53 | 95 | 310 | 223 | + Starch synthase catalytic domain. | ||
| PLN02939 | PLN02939 | 2.0e-56 | 92 | 310 | 224 | + transferase, transferring glycosyl groups | ||
| TIGR02095 | glgA | 3.0e-57 | 92 | 310 | 220 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 8.0e-62 | 93 | 310 | 221 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACD13790.1 | 0 | 12 | 311 | 51 | 344 | starch synthase VI precursor [Solanum lycopersicum] |
| GenBank | ACD13791.1 | 0 | 25 | 311 | 42 | 327 | starch synthase VI precursor [Vitis vinifera] |
| GenBank | ACL36485.1 | 0 | 54 | 310 | 117 | 373 | starch synthase VI precursor [Picea glauca] |
| RefSeq | XP_002268126.1 | 0 | 25 | 311 | 42 | 327 | PREDICTED: starch synthase VI [Vitis vinifera] |
| RefSeq | XP_002331426.1 | 0 | 54 | 311 | 79 | 337 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d1j_A | 0.00000000001 | 92 | 261 | 1 | 167 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 3guh_A | 0.00000000003 | 92 | 261 | 1 | 167 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4u_A | 0.00000000003 | 92 | 261 | 1 | 167 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2r4t_A | 0.00000000003 | 92 | 261 | 1 | 167 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
| PDB | 2qzs_A | 0.00000000003 | 92 | 261 | 1 | 167 | A Chain A, Crystal Structure Of Wild-Type E.Coli Gs In Complex With Adp And Glucose(Wtgsb) |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV438199 | 225 | 54 | 278 | 0 |
| FQ363978 | 198 | 92 | 289 | 0 |
| BE436327 | 202 | 87 | 288 | 0 |
| CO474248 | 199 | 112 | 310 | 0 |
| GT171361 | 207 | 58 | 264 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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