| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000279453 |
| Family | GT31 |
| Protein Properties | Length: 300 Molecular Weight: 33917.8 Isoelectric Point: 7.2506 |
| Chromosome | Chromosome/Scaffold: 007615199 Start: 4053 End: 8792 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT31 | 7 | 162 | 1.4013e-43 |
| LDKAVEAEELAHGDFLRLDHVEGYLELSAKTKTYFSTAVALWDAEFYIKVDDDIHVNLATLGTILSRHRLKPRVYIGCMKSGPVLARKGVKYHEPEFWKF GEIGNKYFLHATGQLYAISKDLATYISRNQDVLHKYANEDVSLGSWFIGLDVEQVD | |||
| Full Sequence |
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| Protein Sequence Length: 300 Download |
| PTAGGILDKA VEAEELAHGD FLRLDHVEGY LELSAKTKTY FSTAVALWDA EFYIKVDDDI 60 HVNLATLGTI LSRHRLKPRV YIGCMKSGPV LARKGVKYHE PEFWKFGEIG NKYFLHATGQ 120 LYAISKDLAT YISRNQDVLH KYANEDVSLG SWFIGLDVEQ VDDRRLCCGT PPDIKRSESS 180 AMAKSSFKLE HTLERRQAEA SRIREKYPDR IPVIVEKAAR SDIPDIDKKK YLVPADLNVG 240 QFVYVVRKRI KLGAEKAIFI FVNNALPPNA ALMSTIYEEN KDLDGFLYLT YSGENVFGSF 300 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00380 | PTZ00380 | 1.0e-9 | 185 | 300 | 117 | + microtubule-associated protein (MAP); Provisional | ||
| pfam01762 | Galactosyl_T | 7.0e-41 | 1 | 164 | 170 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| pfam02991 | Atg8 | 3.0e-59 | 195 | 298 | 104 | + Autophagy protein Atg8 ubiquitin like. Light chain 3 is proposed to function primarily as a subunit of microtubule associated proteins 1A and 1B and that its expression may regulate microtubule binding activity. Autophagy is generally known as a process involved in the degradation of bulk cytoplasmic components that are non-specifically sequestered into an autophagosome, where they are sequestered into double-membrane vesicles and delivered to the degradative organelle, the lysosome/vacuole, for breakdown and eventual recycling of the resulting macromolecules. The yeast proteins are involved in the autophagosome, and Atg8 binds Atg19, via its N-terminus and the C-terminus of Atg19. | ||
| cd01611 | GABARAP | 5.0e-67 | 187 | 298 | 112 | + Ubiquitin domain of GABA-receptor-associated protein. GABARAP (GABA-receptor-associated protein) belongs ot a large family of proteins that mediate intracellular membrane trafficking and/or fusion. GABARAP binds not only to GABA, type A but also to tubulin, gephrin, and ULK1. Orthologues of GABARAP include Gate-16 (golgi-associated ATPase enhancer), LC3 (microtubule-associated protein light chain 3), and ATG8 (autophagy protein 8). ATG8 is a ubiquitin-like protein that is conjugated to the membrane phospholipid, phosphatidylethanolamine as part of a ubiquitin-like conjugation system essential for autophagosome-formation. | ||
| PLN03193 | PLN03193 | 2.0e-119 | 2 | 205 | 205 | + beta-1,3-galactosyltransferase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0000045 | autophagic vacuole assembly |
| GO:0005737 | cytoplasm |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABF69971.1 | 0 | 2 | 232 | 138 | 351 | glycosyl transferase family 31 protein [Musa acuminata] |
| RefSeq | XP_002305569.1 | 0 | 1 | 187 | 160 | 347 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002316532.1 | 0 | 1 | 175 | 194 | 368 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002518474.1 | 0 | 2 | 187 | 169 | 355 | Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] |
| RefSeq | XP_002529902.1 | 0 | 2 | 187 | 19 | 205 | Beta-1,3-galactosyltransferase sqv-2, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2kwc_A | 0 | 184 | 298 | 2 | 116 | A Chain A, The Nmr Structure Of The Autophagy-Related Protein Atg8 |
| PDB | 2li5_A | 0 | 184 | 298 | 3 | 117 | B Chain B, Nmr Structure Of Atg8-Atg7c30 Complex |
| PDB | 3vh4_B | 0 | 184 | 298 | 5 | 119 | B Chain B, Nmr Structure Of Atg8-Atg7c30 Complex |
| PDB | 3vh3_B | 0 | 184 | 298 | 5 | 119 | B Chain B, Crystal Structure Of Atg7ctd-Atg8 Complex |
| PDB | 3vxw_A | 0 | 181 | 298 | 2 | 119 | B Chain B, Crystal Structure Of Saccharomyces Cerevisiae Atg8 Complexed With Atg32 Aim |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| DV220900 | 187 | 2 | 187 | 0 |
| EE089898 | 204 | 2 | 204 | 0 |
| FE691091 | 205 | 2 | 205 | 0 |
| DT024965 | 187 | 2 | 187 | 0 |
| DT024966 | 187 | 2 | 187 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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