| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000280416 |
| Family | GT5 |
| Protein Properties | Length: 713 Molecular Weight: 80160.5 Isoelectric Point: 7.979 |
| Chromosome | Chromosome/Scaffold: 005814427 Start: 12854 End: 22309 |
| Description | UDP-Glycosyltransferase superfamily protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT5 | 266 | 650 | 0 |
| HIVHVCTEMAPLVSFGSLASYVTGLSCALQRKGNLVEVILPKFSSLDLNEVRGLKEVEAECYSYYNGQLHGNKIWTGVVYGIGVTLIQPLYYSSFFNRER LYGYSDDFERFTYFSRASLDYIVKSGKRPDVIHIHNWETAIIGPLFWDITVKQCLEHPEKLELCGLDPARLHRPDRLQDNTKAHLVNILKGGVVYSNKVV IMSSILSKGRVIQRLSHGLDPTLNIHKNKVIIAPCGFDNSTWDPSTDNFLPVQYNAKDMKGKTVCKAALQQHLGLSEHASTFLVGCIFSKVSDVDLEKLR EVFSKTSRIDVQFIVMGIGKISSVNKLGSLHEPLKDANVQFIDGNDEALSHLVFAGSDIILCQSFHDPDLQVPLKALXYGAAPIT | |||
| Full Sequence |
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| Protein Sequence Length: 713 Download |
| MNRGLSRCSS SSTNWPSGLD WTRLSPGLWI SYKAQEEHSL ISGGSIFSIT RTHSTRTRIQ 60 NRNLRYQPRE KSRVSLCLST GSSLVESNGK EKSRLLSSPP PPLLTPFGRK NDGADEQLDP 120 PPVAVATTAS ETSNSTSLLL RRQCLLLLLL RNELNQQRIK AVEELNKINR EKELLVDRIE 180 QLELEKQAAI ARPQDRVSCW ELLFRIDSMV LNGMVTTVEA SDLRRLVMDN KFSLPEVFND 240 TLQKGDTEIL AELRHFSERI KRNGFHIVHV CTEMAPLVSF GSLASYVTGL SCALQRKGNL 300 VEVILPKFSS LDLNEVRGLK EVEAECYSYY NGQLHGNKIW TGVVYGIGVT LIQPLYYSSF 360 FNRERLYGYS DDFERFTYFS RASLDYIVKS GKRPDVIHIH NWETAIIGPL FWDITVKQCL 420 EHPEKLELCG LDPARLHRPD RLQDNTKAHL VNILKGGVVY SNKVVIMSSI LSKGRVIQRL 480 SHGLDPTLNI HKNKVIIAPC GFDNSTWDPS TDNFLPVQYN AKDMKGKTVC KAALQQHLGL 540 SEHASTFLVG CIFSKVSDVD LEKLREVFSK TSRIDVQFIV MGIGKISSVN KLGSLHEPLK 600 DANVQFIDGN DEALSHLVFA GSDIILCQSF HDPDLQVPLK ALXYGAAPIT VNSNDEGFGX 660 FVEHNYETTN FSRFISSXFG NMTLSQALDE IVFRCRELGS RDVQXRNRVG MSG 720 |
| Functional Domains Download unfiltered results here | ||||||
|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
| PLN02316 | PLN02316 | 1.0e-44 | 266 | 649 | 394 | + synthase/transferase |
| PRK00654 | glgA | 2.0e-61 | 266 | 667 | 455 | + glycogen synthase; Provisional |
| cd03791 | GT1_Glycogen_synthase_DULL1_like | 1.0e-66 | 266 | 649 | 429 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| TIGR02095 | glgA | 2.0e-67 | 265 | 649 | 410 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. |
| PLN02939 | PLN02939 | 3.0e-102 | 202 | 649 | 468 | + transferase, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACD13787.1 | 0 | 154 | 691 | 94 | 648 | starch synthase V precursor [Lotus japonicus] |
| GenBank | ACD13788.1 | 0 | 154 | 691 | 85 | 638 | starch synthase V precursor [Solanum tuberosum] |
| GenBank | ACD13789.1 | 0 | 154 | 691 | 89 | 643 | starch synthase V precursor [Vitis vinifera] |
| RefSeq | XP_002310316.1 | 0 | 198 | 691 | 120 | 630 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002528907.1 | 0 | 263 | 692 | 205 | 651 | starch synthase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1rzv_B | 1e-17 | 265 | 654 | 1 | 398 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzv_A | 1e-17 | 265 | 654 | 1 | 398 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
| PDB | 1rzu_B | 1e-17 | 265 | 654 | 1 | 398 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 1rzu_A | 1e-17 | 265 | 654 | 1 | 398 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| PDB | 3guh_A | 1e-17 | 266 | 650 | 2 | 395 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CO901418 | 228 | 458 | 685 | 0 |
| EL455989 | 315 | 234 | 531 | 0 |
| EY766100 | 287 | 278 | 547 | 0 |
| EY764753 | 242 | 237 | 461 | 0 |
| EY764753 | 26 | 459 | 484 | 1 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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