Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000283839 |
Family | GT5 |
Protein Properties | Length: 792 Molecular Weight: 88006 Isoelectric Point: 5.361 |
Chromosome | Chromosome/Scaffold: 008349280 Start: 2713 End: 6715 |
Description | starch synthase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 287 | 785 | 0 |
NVILVAAECAPWSKTGGLGDVAGALPKALARRGHRVMVVAPRYGDYAEPQDSGVRKAYKVDGQYMEVAYFHAYIDGVDFVFIESAVFRHMEHNIYGGKRE DILKRMVLFCKAAVEVPWLVPCGGVCYGDGNLAFIANDWHTALLPVYLKAYYRDNGLMIYTRSILVIHNIAHQYKELFAWIISVKFIQGRGPVADFSFVD LPGHYLDLFKMYDPIGGEHFNIFAAGLKTADRVVTVSHGYAWELKTVDGGWGLHGIINENDWKFRGIVNGIDTEDWNPQYDVFLKSDGYTNYSLETLKTG KAQCKAALQKELGLPVREDVPVIGFIGRLDHQKGVDLIAEAIPWMMGQDVQLIMLGSGRPDLEEMLRAFEHQHRDKVRGWVGFSVQTAHRITAGADILLM PSRFEPCGXNQLYAMNYGTIPVVHAVGGLRDTVHPFNPYEESGLGWTFDSAEVGKLIHALGNCFYTYRDYKQSWEGIQRRGMMQDLSWDHAAQNYEEVL |
Full Sequence |
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Protein Sequence Length: 792 Download |
MASIGSLHFI MGTKTDSSVL VHSSTNPRLR FPFFTNRPRS SIEVSGINAS ANGSAGAARM 60 CRGRNSWCTR GKLWRIKPLR AIRKSSAEGE DAGEPEDALQ ATIEKSKKVL AVQRELLQQI 120 SERRKLVSSI QNSDISQEEG EASFEQGNES FSNAESSSSS VDKSVDQIGS IVLSSYEHST 180 EEKDFETVPS ALSGGLDEIE KDHGDALPFD KSPSELESSN HVGKDSSKTE WSDGLPTFLT 240 NPESSMLKDD ELIDLKETSE EEVSDGATGF TSEDVKPPPL AGPNVMNVIL VAAECAPWSK 300 TGGLGDVAGA LPKALARRGH RVMVVAPRYG DYAEPQDSGV RKAYKVDGQY MEVAYFHAYI 360 DGVDFVFIES AVFRHMEHNI YGGKREDILK RMVLFCKAAV EVPWLVPCGG VCYGDGNLAF 420 IANDWHTALL PVYLKAYYRD NGLMIYTRSI LVIHNIAHQY KELFAWIISV KFIQGRGPVA 480 DFSFVDLPGH YLDLFKMYDP IGGEHFNIFA AGLKTADRVV TVSHGYAWEL KTVDGGWGLH 540 GIINENDWKF RGIVNGIDTE DWNPQYDVFL KSDGYTNYSL ETLKTGKAQC KAALQKELGL 600 PVREDVPVIG FIGRLDHQKG VDLIAEAIPW MMGQDVQLIM LGSGRPDLEE MLRAFEHQHR 660 DKVRGWVGFS VQTAHRITAG ADILLMPSRF EPCGXNQLYA MNYGTIPVVH AVGGLRDTVH 720 PFNPYEESGL GWTFDSAEVG KLIHALGNCF YTYRDYKQSW EGIQRRGMMQ DLSWDHAAQN 780 YEEVLVAAKY QW |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK14099 | PRK14099 | 2.0e-76 | 286 | 789 | 528 | + glycogen synthase; Provisional | ||
COG0297 | GlgA | 1.0e-133 | 286 | 783 | 508 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
PRK00654 | glgA | 4.0e-162 | 286 | 784 | 508 | + glycogen synthase; Provisional | ||
TIGR02095 | glgA | 0 | 286 | 788 | 507 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 0 | 287 | 785 | 510 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
Gene Ontology | |
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GO Term | Description |
GO:0009058 | biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAF13168.1 | 0 | 1 | 792 | 1 | 751 | AF173900_1 granule bound starch synthase II precursor [Manihot esculenta] |
GenBank | ABV25894.1 | 0 | 1 | 792 | 1 | 751 | starch synthase isoform II [Manihot esculenta] |
EMBL | CBI22230.1 | 0 | 1 | 792 | 6 | 788 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002278470.1 | 0 | 1 | 792 | 1 | 772 | PREDICTED: similar to starch synthase [Vitis vinifera] |
RefSeq | XP_002531856.1 | 0 | 1 | 792 | 1 | 754 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3vuf_A | 0 | 286 | 786 | 10 | 509 | B Chain B, Structural Basis Of Gibberellin(Ga3)-Induced Della Recognition By The Gibberellin Receptor |
PDB | 3vue_A | 0 | 286 | 786 | 10 | 509 | A Chain A, Crystal Structure Of Rice Granule Bound Starch Synthase I Catalytic Domain |
PDB | 3d1j_A | 0 | 286 | 784 | 1 | 472 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 3guh_A | 0 | 286 | 791 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
PDB | 2r4u_A | 0 | 286 | 791 | 1 | 479 | A Chain A, Crystal Structure Of E.Coli Gs Mutant Dmgs(C7s;c40 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO781048 | 406 | 387 | 792 | 0 |
HO445868 | 452 | 341 | 792 | 0 |
HO411612 | 431 | 363 | 792 | 0 |
HO390058 | 476 | 321 | 792 | 0 |
HO781048 | 41 | 345 | 385 | 2 |
Sequence Alignments (This image is cropped. Click for full image.) |
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