| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000287234 |
| Family | CE8 |
| Protein Properties | Length: 335 Molecular Weight: 37348 Isoelectric Point: 4.6408 |
| Chromosome | Chromosome/Scaffold: 009255257 Start: 3660 End: 5200 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 38 | 319 | 0 |
| IIVDKSGRGNFTTVQQAIDSVPPNNSLWIRILLNPDVYTEKVMIPKEKPYIVLEGDPKFPATIEYGDAGSVIDSPTFKLFADNFVARSIIFKNSYDHLIL PDPNGXKTTWAPAILISADKASFHHCSFISLQDTLTDDGGRXYFYDCFIEGAIDFIWGNGQSIYEKCQIFSITDRIGITGFITAQGRKAPNETTGFVLKD CYVNGTGTTFLGRPWRPYSRVLFAXTFMENIITPEGWSPWPPAPVDSVAFSEANCQGPGANLSGRVPWEKKLSDEEVAYFTN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 335 Download |
| MESLISTIFS LLLFFDSTLG GRYKATKNAL ENDVSSTIIV DKSGRGNFTT VQQAIDSVPP 60 NNSLWIRILL NPDVYTEKVM IPKEKPYIVL EGDPKFPATI EYGDAGSVID SPTFKLFADN 120 FVARSIIFKN SYDHLILPDP NGXKTTWAPA ILISADKASF HHCSFISLQD TLTDDGGRXY 180 FYDCFIEGAI DFIWGNGQSI YEKCQIFSIT DRIGITGFIT AQGRKAPNET TGFVLKDCYV 240 NGTGTTFLGR PWRPYSRVLF AXTFMENIIT PEGWSPWPPA PVDSVAFSEA NCQGPGANLS 300 GRVPWEKKLS DEEVAYFTNP XSFIDQEGWL RXQPN 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02480 | PLN02480 | 1.0e-84 | 37 | 330 | 300 | + Probable pectinesterase | ||
| PLN02665 | PLN02665 | 3.0e-88 | 37 | 335 | 306 | + pectinesterase family protein | ||
| PLN02682 | PLN02682 | 5.0e-92 | 23 | 331 | 321 | + pectinesterase family protein | ||
| PLN02432 | PLN02432 | 2.0e-92 | 33 | 331 | 302 | + putative pectinesterase | ||
| PLN02497 | PLN02497 | 1.0e-111 | 37 | 334 | 301 | + probable pectinesterase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI40838.1 | 0 | 37 | 334 | 44 | 341 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002263748.1 | 0 | 37 | 334 | 31 | 328 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277604.1 | 0 | 31 | 327 | 39 | 347 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002277604.1 | 0 | 46 | 334 | 371 | 658 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002512520.1 | 0 | 10 | 314 | 8 | 311 | Pectinesterase-2 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1gq8_A | 0 | 34 | 331 | 5 | 309 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 1xg2_A | 6e-35 | 39 | 331 | 6 | 305 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 3uw0_A | 5e-22 | 32 | 325 | 27 | 360 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_B | 1e-18 | 48 | 318 | 18 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
| PDB | 2ntq_A | 1e-18 | 48 | 318 | 18 | 329 | A Chain A, Pectin Methylesterase From Yersinia Enterocolitica |
