y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000288190 |
Family | GT35 |
Protein Properties | Length: 1389 Molecular Weight: 157560 Isoelectric Point: 7.872 |
Chromosome | Chromosome/Scaffold: 009600164 Start: 15438 End: 28395 |
Description | alpha-glucan phosphorylase 2 |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT35 | 293 | 1004 | 0 |
ALSQLGFEFEVLAEQEGDAALGNGGLARLSACQMDSMATLDYPAWGYGLRYEYGLFRQVILDGFQHEQPDFWLNFGNPWETERVHVTYPVKFYGVVEEEN LNGEKRNIWTPGEVVEAVAYDNPIPGYGTRNTITLRLWAGKPSDQHDMEAYNTGDYINAVVSRQKAENISSVLYPDDRSFQGKELRLKQQYFFVSASIQD IIRRFKDGHTNFDEFPEKVALQLNDTHPSLAIAEVMRVLVDEENLGWNEAWDIACKIFSFTIHAVIAEGLEKIPVDLLGSLLPRHLQIIYDINFKFVEEL KKRIGLDYNRLSRMSIVEEGSTKTIRMANLAIVCSHTVNGVSNVHSELLKTKLFKDFYELWPEKFQCKTNGVTQRRWIVVSNPSLCALISKWLGTEAWIR DVDLLTGLREYAADADLQQEWMMVKKVNKMRLAEYIEAMSGVKVSLDAMFDVQTKRIHEYKRQLLNILGIIHRYDCIKNMEKSQRNKVVPRVCIIGGKAA PGYEIAKKIIKLCHAVAEKINNDDDVGDLLKLVFIPDYNVSVAELVIPGADLSQHLSTAGHEASGTGSMKFLMNGCLLLATEDGSTVEIVEEIGADNLFL FGAKIDEVPKLREEGSAHKMPLQCARVLRMVRDGHFGFKDYFESLCDKVEGNDFYLLGSDFESYLEAQAAADKAFADPQKWTQMSILSTAGSGRFSSDRT IRDYAEKTWGVE |
Full Sequence |
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Protein Sequence Length: 1389 Download |
MSTISSRFLP INDQPKLAYS SSTSPPPPFP QHSRTCSRPR RSSVPYTRTR VAKPIRASAA 60 QPPSATSSVT VEIPESESDP SATVFVIRAR NRIGLLQVIT RVFKVLGLHV DKATVEFEGE 120 YFVKRFFVTD SRGAKISDPE NLERIKNALA EAIEDGGSIS VGPTSPTTRG VVVRRPGSGL 180 GLTFGSDGAK AERMFALMDG FLKNDSISLQ KDILHHVEYT VARSRFSFDD FEAYQALAHS 240 VRDRLIERSH DTQLYFKRKD PKRVYFLSLE FLMGRSLSNS VXNLGIRDQY ADALSQLGFE 300 FEVLAEQEGD AALGNGGLAR LSACQMDSMA TLDYPAWGYG LRYEYGLFRQ VILDGFQHEQ 360 PDFWLNFGNP WETERVHVTY PVKFYGVVEE ENLNGEKRNI WTPGEVVEAV AYDNPIPGYG 420 TRNTITLRLW AGKPSDQHDM EAYNTGDYIN AVVSRQKAEN ISSVLYPDDR SFQGKELRLK 480 QQYFFVSASI QDIIRRFKDG HTNFDEFPEK VALQLNDTHP SLAIAEVMRV LVDEENLGWN 540 EAWDIACKIF SFTIHAVIAE GLEKIPVDLL GSLLPRHLQI IYDINFKFVE ELKKRIGLDY 600 NRLSRMSIVE EGSTKTIRMA NLAIVCSHTV NGVSNVHSEL LKTKLFKDFY ELWPEKFQCK 660 TNGVTQRRWI VVSNPSLCAL ISKWLGTEAW IRDVDLLTGL REYAADADLQ QEWMMVKKVN 720 KMRLAEYIEA MSGVKVSLDA MFDVQTKRIH EYKRQLLNIL GIIHRYDCIK NMEKSQRNKV 780 VPRVCIIGGK AAPGYEIAKK IIKLCHAVAE KINNDDDVGD LLKLVFIPDY NVSVAELVIP 840 GADLSQHLST AGHEASGTGS MKFLMNGCLL LATEDGSTVE IVEEIGADNL FLFGAKIDEV 900 PKLREEGSAH KMPLQCARVL RMVRDGHFGF KDYFESLCDK VEGNDFYLLG SDFESYLEAQ 960 AAADKAFADP QKWTQMSILS TAGSGRFSSD RTIRDYAEKT WGVEPYRCKF REIGKLKHSI 1020 ADDKFSSSDS VAISISRLLL VVSLRSVRND MLTFPHARRR RPRRQLPQPA PPIQPQDRPL 1080 RYLRSLQSIL AESVQNLSEK IVRIEEREKR IDEMSQKIHH LQSVLSTLKG DSIRADGRIN 1140 ALEEEVRILW EASRKFNFDL HVLESKAQDA EDRLKTVASQ ARKMTDIVTE QWIQIQRLEQ 1200 ALYITQARTM RLQRQVSSGR CTFLEFMNRL YDDHLPKMVG PNLRSYFSQA QHQLKRVFEA 1260 VKKSHHELQH FIKDKLEENE FTAALAHEEL VFFMLKPLQV LNERNIRDFD YVLTALHRHP 1320 NPLLPQLGLP SNPLHQIRLP SNPPPICHLP LPQKGLQIRA PPDLLEVQVP LPAAPAIGPC 1380 KGRRGSSVG 1440 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd04300 | GT1_Glycogen_Phosphorylase | 0 | 210 | 1003 | 802 | + This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. | ||
TIGR02093 | P_ylase | 0 | 213 | 1003 | 803 | + glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
pfam00343 | Phosphorylase | 0 | 293 | 1005 | 719 | + Carbohydrate phosphorylase. The members of this family catalyze the formation of glucose 1-phosphate from one of the following polyglucoses; glycogen, starch, glucan or maltodextrin. | ||
PRK14986 | PRK14986 | 0 | 208 | 1007 | 813 | + glycogen phosphorylase; Provisional | ||
COG0058 | GlgP | 0 | 208 | 1005 | 812 | + Glucan phosphorylase [Carbohydrate transport and metabolism] |
Gene Ontology | |
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GO Term | Description |
GO:0004645 | phosphorylase activity |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI30609.1 | 0 | 198 | 1008 | 1 | 812 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001757919.1 | 0 | 198 | 1005 | 1 | 809 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002273615.1 | 0 | 194 | 1008 | 1 | 816 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002305114.1 | 0 | 194 | 1010 | 1 | 818 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002509431.1 | 0 | 70 | 1010 | 63 | 949 | glycogen phosphorylase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ygp_B | 0 | 204 | 1005 | 39 | 877 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 1ygp_A | 0 | 204 | 1005 | 39 | 877 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 9gpb_D | 0 | 209 | 1007 | 27 | 831 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 9gpb_C | 0 | 209 | 1007 | 27 | 831 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
PDB | 9gpb_B | 0 | 209 | 1007 | 27 | 831 | A Chain A, Phosphorylated Form Of Yeast Glycogen Phosphorylase With Phosphate Bound In The Active Site. |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO779924 | 618 | 103 | 718 | 0 |
HO586252 | 540 | 469 | 1005 | 0 |
HO417459 | 294 | 620 | 913 | 0 |
HO417459 | 212 | 421 | 626 | 0 |
HO779924 | 33 | 70 | 102 | 0.72 |
Sequence Alignments (This image is cropped. Click for full image.) |
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