y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000290571 |
Family | GT47 |
Protein Properties | Length: 787 Molecular Weight: 89318.1 Isoelectric Point: 8.6679 |
Chromosome | Chromosome/Scaffold: 009233164 Start: 2668 End: 8205 |
Description | Exostosin family protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT47 | 160 | 431 | 0 |
NKDLLKKCGSLSNWTDMCELASNFGLGPHLSNFEKVYSNTGWFATNCLTKNSSLASAIFVPYYAGLDVARYLWGPSISMRDSGSLEIAKWLREKPEWKKM WGRDHFMVAGRITWDFRRWTDKDSEWGTKLMLLPESKNMTMLAMESSPWNSNDFAIPYPTYFHPSKDIEVFQWQNRMRKQKRPILFSFAGGPRPNLQNSI RNEIIDQCRAARRKCKLLECTSGPDKCHKPIFVMKMFQGSVFCLQPPGDSLTRRSIFDSILAGCIPVFFHPG |
Full Sequence |
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Protein Sequence Length: 787 Download |
MGRHFVTFSA CRNQYWFVCA SFLIWFLLLC VYHSQFMVGK SLIALLGNHN INISFDVASE 60 SDNLVDSVSL PEEINESSSR KSRDDAHMNI VFNDRSGGDF NLRTKDVFGI TEHGFEKFGH 120 LSKKESEPRD RNDQARDLCE NKAQSEKGDD AVEPEEHVLN KDLLKKCGSL SNWTDMCELA 180 SNFGLGPHLS NFEKVYSNTG WFATNCLTKN SSLASAIFVP YYAGLDVARY LWGPSISMRD 240 SGSLEIAKWL REKPEWKKMW GRDHFMVAGR ITWDFRRWTD KDSEWGTKLM LLPESKNMTM 300 LAMESSPWNS NDFAIPYPTY FHPSKDIEVF QWQNRMRKQK RPILFSFAGG PRPNLQNSIR 360 NEIIDQCRAA RRKCKLLECT SGPDKCHKPI FVMKMFQGSV FCLQPPGDSL TRRSIFDSIL 420 AGCIPVFFHP GSAQKVYDMR EEVVKLIPRV IYADPGSRLE TLEDAFDIAV KGVLERVETI 480 RKDMREGKNT SFDYVEKSVT FHTPISWRPR APPSLHTWWG PQSPNFPETL EPPELRSPSE 540 SPQAVTTRRP AISSPRAPTA STSARSKPPA KKPSKPSTVS GDPLIVDDMF DRVEMKLRWY 600 GSKCVVKYPR CSLRRQSTYA DAEEDFSQVF ALASIWILFL AFGSSVCLVP VFYTVGLAYQ 660 DAFNPVFSYI NQAPALSMLN SVLFVTLGSV IGYPIASASV KVLKGLWRND LVALKGACPN 720 CGDEVFAFVK SDQSNNSPHR ANCHVCECLL EFRTKVEKSV SPLGRRWVYG RIYLVSRGGR 780 SELQRRQ 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 3.0e-46 | 206 | 428 | 235 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
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GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN64889.1 | 0 | 159 | 497 | 314 | 707 | hypothetical protein [Vitis vinifera] |
EMBL | CAN64889.1 | 0 | 580 | 775 | 851 | 1047 | hypothetical protein [Vitis vinifera] |
RefSeq | XP_002280815.1 | 0 | 159 | 497 | 107 | 500 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313430.1 | 0 | 159 | 496 | 154 | 547 | glycosyltransferase, CAZy family GT47 [Populus trichocarpa] |