| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000293317 |
| Family | AA7 |
| Protein Properties | Length: 559 Molecular Weight: 61500.8 Isoelectric Point: 5.8801 |
| Chromosome | Chromosome/Scaffold: 012810113 Start: 6671 End: 14484 |
| Description | FAD-linked oxidases family protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| AA7 | 136 | 331 | 1.6e-24 |
| NIPDIVVFPGSEEQVSMIVKSCDKHKVPIVPYGGATSIEGHTLSPNGGVCXDMSLMNHVKALHIEDMDVVVEPGIGWMELNEYLAPYGLFFPLDPGPGAT IGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGDIVKTASRARKSAAGYDLTRLVIGSEGTLGVITEVTLRLQKIPQYSVVAMCNFPSIKDAADV | |||
| Full Sequence |
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| Protein Sequence Length: 559 Download |
| MAMASWFSRL RRSSQRFFFT SSALRTSMST KLARTQNTTN SESPKTPFLX WSSSLLPVAL 60 AVSAGSLALR PQLDPSLCEA PSANSRNEFV VKGLCKEVPQ ELVDELKDVC QDNMTMDYEE 120 RYNHGKPQNS FHKAVNIPDI VVFPGSEEQV SMIVKSCDKH KVPIVPYGGA TSIEGHTLSP 180 NGGVCXDMSL MNHVKALHIE DMDVVVEPGI GWMELNEYLA PYGLFFPLDP GPGATIGGMC 240 ATRCSGSLAV RYGTMRDNVI SLKVVLANGD IVKTASRARK SAAGYDLTRL VIGSEGTLGV 300 ITEVTLRLQK IPQYSVVAMC NFPSIKDAAD VAIATMLSGI QVSRVELLDE VQVRAINIAN 360 GKNFLETPTL MFEFIGTEAY SREQTHIVQQ IVSEHNGSDF VFAEDPEAKK ELWKIRKEAL 420 WACFAMEPNF EAMISDVCVP LSCLAELISR SKEQLDXSEL VCTVIAHAGD GNFHTVILFD 480 PNNEEHRREA ERLNHFMVHT ALSMEGTCTG EHGVGTGKMK YLEQELGMEA LKTMKRIKAA 540 LDPNNTMNPG KLIPAHVCF 600 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK11230 | PRK11230 | 4.0e-53 | 137 | 558 | 427 | + glycolate oxidase subunit GlcD; Provisional | ||
| pfam02913 | FAD-oxidase_C | 5.0e-68 | 311 | 552 | 247 | + FAD linked oxidases, C-terminal domain. This domain has a ferredoxin-like fold. | ||
| TIGR00387 | glcD | 7.0e-93 | 141 | 551 | 415 | + glycolate oxidase, subunit GlcD. This protein, the glycolate oxidase GlcD subunit, is similar in sequence to that of several D-lactate dehydrogenases, including that of E. coli. The glycolate oxidase has been found to have some D-lactate dehydrogenase activity [Energy metabolism, Other]. | ||
| COG0277 | GlcD | 6.0e-123 | 105 | 554 | 464 | + FAD/FMN-containing dehydrogenases [Energy production and conversion] | ||
| PLN02805 | PLN02805 | 0 | 25 | 559 | 543 | + D-lactate dehydrogenase [cytochrome] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0008762 | UDP-N-acetylmuramate dehydrogenase activity |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001142976.1 | 0 | 88 | 559 | 84 | 555 | hypothetical protein LOC100275430 [Zea mays] |
| RefSeq | NP_568170.1 | 0 | 51 | 559 | 49 | 567 | FAD linked oxidase family protein [Arabidopsis thaliana] |
| RefSeq | XP_002267321.1 | 0 | 1 | 559 | 1 | 566 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002322755.1 | 0 | 88 | 559 | 8 | 480 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002524111.1 | 0 | 1 | 559 | 1 | 555 | d-lactate dehydrogenase, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3pm9_F | 5.99756e-43 | 140 | 553 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_E | 5.99756e-43 | 140 | 553 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_D | 5.99756e-43 | 140 | 553 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_C | 5.99756e-43 | 140 | 553 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| PDB | 3pm9_B | 5.99756e-43 | 140 | 553 | 54 | 476 | A Chain A, Crystal Structure Of A Putative Dehydrogenase (Rpa1076) From Rhodopseudomonas Palustris Cga009 At 2.57 A Resolution |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| EX265038 | 322 | 153 | 473 | 0 |
| EX261606 | 322 | 209 | 526 | 0 |
| DY305587 | 296 | 194 | 489 | 0 |
| DT747637 | 285 | 181 | 465 | 0 |
| DY305587 | 65 | 488 | 552 | 3.4 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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