| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000298053 |
| Family | CBM57 |
| Protein Properties | Length: 519 Molecular Weight: 57374.5 Isoelectric Point: 4.9652 |
| Chromosome | Chromosome/Scaffold: 013067235 Start: 2613 End: 6079 |
| Description | Di-glucose binding protein with Leucine-rich repeat domain |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM57 | 128 | 275 | 2.8e-24 |
| NDTDLFGRSWQNDKDFXFTDAVSESAVRYVSTRNTIANTDQSPNYFPMKLYQSATVVDGKALEYELPVDAKLDYLLWFHFAEIDSSVKKAGQRVFNILIN GKNVNRIDIFKEVGSFAAYTWHYTVKNLSSSVLNVKLQSVAGAALISG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 519 Download |
| NCYIIPNLPS GRYYIRTFTV YDNYDGRSHS PSFDVSVEGT VVFSWRSPWS EDLARNGAYS 60 DLFALVADSE ADICFYSIAT DPPVIGSLQL IRVDPDSYDA GSIGKNYILV NYGRLTCGSD 120 QFGPGFSNDT DLFGRSWQND KDFXFTDAVS ESAVRYVSTR NTIANTDQSP NYFPMKLYQS 180 ATVVDGKALE YELPVDAKLD YLLWFHFAEI DSSVKKAGQR VFNILINGKN VNRIDIFKEV 240 GSFAAYTWHY TVKNLSSSVL NVKLQSVAGA ALISGLENYA LVPADVATVP EQVVAMRALK 300 ESLRVPDRMG WNGDPCAPSN WDAWEGVSCQ HDKNGTVLII SGIDLGSQGL KGFISDQISL 360 LSNLVSLDLS NNEFTGPIPQ SLXTSNLQLL LLNNNLLEGK VPEELYSIGV HGGAIDLYGN 420 KGLCGVPSLP DCPLFWENGG LSKKGKIAIV VSCVLVFCLV VLALYIFCIR RRRNDYDFSL 480 PQDLMALSAK RNRYQRQKSL MLLEMESQHA KASTPLTPQ |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam11721 | Malectin | 8.0e-13 | 117 | 276 | 174 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. | ||
| pfam12819 | Malectin_like | 3.0e-47 | 1 | 279 | 292 | + Carbohydrate-binding protein of the ER. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. The domain is found on a number of plant receptor kinases. | ||
| PLN03150 | PLN03150 | 4.0e-88 | 1 | 474 | 505 | + hypothetical protein; Provisional | ||
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAG50525.1 | 0 | 1 | 493 | 87 | 550 | AC084221_7 hypothetical protein [Arabidopsis thaliana] |
| RefSeq | NP_564237.2 | 0 | 1 | 519 | 87 | 628 | leucine-rich repeat protein-related [Arabidopsis thaliana] |
| RefSeq | XP_002281668.1 | 0 | 1 | 512 | 88 | 618 | PREDICTED: similar to leucine-rich repeat protein-related [Vitis vinifera] |
| RefSeq | XP_002457393.1 | 0 | 1 | 509 | 89 | 621 | hypothetical protein SORBIDRAFT_03g006620 [Sorghum bicolor] |
| RefSeq | XP_002524408.1 | 0 | 1 | 491 | 81 | 591 | serine-threonine protein kinase, plant-type, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 4hq1_A | 0.00000008 | 295 | 406 | 31 | 131 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 4hq1_A | 0.0001 | 292 | 402 | 324 | 427 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
| PDB | 3rj0_A | 0.001 | 343 | 432 | 658 | 745 | A Chain A, Crystal Structure Of Chondroitin Polymerase From Escherichia Coli Strain K4 (K4cp) Complexed With Udp-Glcua And Udp |
