| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000300462 |
| Family | GH2 |
| Protein Properties | Length: 363 Molecular Weight: 41500.3 Isoelectric Point: 6.5116 |
| Chromosome | Chromosome/Scaffold: 015439174 Start: 307 End: 1970 |
| Description | glycoside hydrolase family 2 protein |
| View CDS | |
| External Links |
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| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH2 | 2 | 349 | 0 |
| GKQSLYKVSITVDVKGYGESDLWGQLFGFRKIHSYIDTVTGGRLFKVNGQPIFIRGGNWILSDGLLRLSKKRYKTDIKFHADMNFNMIRCWGGGLAERPD FYHYCDIYGLLVWQEFWITGDVDGRGIPVSNPDGPLDHDLFLLSARDTVKLLRNHPSLALWVGGNEQVPPDDINTALKNDLRLHPHFEKSVNESGKSTED LSPVLRDPSQYLDGMPVSATIRATMPPEGWQIPLFKKVSEYYEEVPNPIWEYHKYIPYSKPGKVHDQILLYGSQPKDLDDFCLKAQLVNYIQYRALLEGW TSRMWTKYTGVLIWKTQNPWTGFYGCRCAAEPIHVQLNLATYLIEVVN | |||
| Full Sequence |
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| Protein Sequence Length: 363 Download |
| MGKQSLYKVS ITVDVKGYGE SDLWGQLFGF RKIHSYIDTV TGGRLFKVNG QPIFIRGGNW 60 ILSDGLLRLS KKRYKTDIKF HADMNFNMIR CWGGGLAERP DFYHYCDIYG LLVWQEFWIT 120 GDVDGRGIPV SNPDGPLDHD LFLLSARDTV KLLRNHPSLA LWVGGNEQVP PDDINTALKN 180 DLRLHPHFEK SVNESGKSTE DLSPVLRDPS QYLDGMPVSA TIRATMPPEG WQIPLFKKVS 240 EYYEEVPNPI WEYHKYIPYS KPGKVHDQIL LYGSQPKDLD DFCLKAQLVN YIQYRALLEG 300 WTSRMWTKYT GVLIWKTQNP WTGFYGCRCA AEPIHVQLNL ATYLIEVVNT TSEELSDIAI 360 EAS 420 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02836 | Glyco_hydro_2_C | 0.0001 | 45 | 167 | 127 | + Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. | ||
| PRK09525 | lacZ | 2.0e-5 | 29 | 167 | 159 | + beta-D-galactosidase; Reviewed | ||
| PRK10340 | ebgA | 4.0e-8 | 6 | 167 | 175 | + cryptic beta-D-galactosidase subunit alpha; Reviewed | ||
| COG3250 | LacZ | 6.0e-24 | 5 | 167 | 165 | + Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism] | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAK84953.2 | 0 | 1 | 363 | 109 | 536 | putative beta-mannosidase [Gossypium hirsutum] |
| EMBL | CAN82620.1 | 0 | 1 | 363 | 298 | 725 | hypothetical protein [Vitis vinifera] |
| EMBL | CBI36793.1 | 0 | 1 | 363 | 298 | 725 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002284576.1 | 0 | 1 | 363 | 298 | 725 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002319539.1 | 0 | 1 | 363 | 298 | 725 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2vqu_B | 4e-17 | 46 | 167 | 323 | 437 | A Chain A, Structural And Biochemical Evidence For A Boat-Like Transition State In Beta-Mannosidases |
| PDB | 2vqu_A | 4e-17 | 46 | 167 | 323 | 437 | A Chain A, Structural And Biochemical Evidence For A Boat-Like Transition State In Beta-Mannosidases |
| PDB | 2je8_B | 4e-17 | 46 | 167 | 325 | 439 | A Chain A, Structure Of A Beta-Mannosidase From Bacteroides Thetaiotaomicron |
| PDB | 2je8_A | 4e-17 | 46 | 167 | 325 | 439 | A Chain A, Structure Of A Beta-Mannosidase From Bacteroides Thetaiotaomicron |
| PDB | 2wbk_B | 4e-17 | 46 | 167 | 323 | 437 | A Chain A, Structure Of The Michaelis Complex Of Beta-Mannosidase, Man2a, Provides Insight Into The Conformational Itinerary Of Mannoside Hydrolysis |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| ES793920 | 339 | 75 | 346 | 0 |
| GO871600 | 337 | 3 | 285 | 0 |
| EY886348 | 218 | 1 | 218 | 0 |
| DB946111 | 214 | 5 | 218 | 0 |
| CV096311 | 210 | 9 | 218 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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