| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000304668 |
| Family | GT29 |
| Protein Properties | Length: 1235 Molecular Weight: 139508 Isoelectric Point: 8.6425 |
| Chromosome | Chromosome/Scaffold: 017633242 Start: 4874 End: 11061 |
| Description | Pentatricopeptide repeat (PPR) superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT29 | 130 | 325 | 2.09999e-41 |
| KCYNKTLCEEHLNVLLPAKPPFHPRQFRTCAVVGNSGDLLMTEFGKEIDSHDAVIRDNEAPVNEKYAKYVGMKRDFRLVVRGAARNMVSILNGSADEVLI IKSVTHKDFNAMIKSITNPVYLFQGIVLRRGAKGTGMKSVELALSXCDIVDIYGFTVDPGYTEWTRYFSTPRKGHNPLQGRAYYQLLECLGVIRIH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 1235 Download |
| MRSHRQASSS NNLNRRPTIL YLVCSVAFFS LLLFAIQSSL FAGNQKLDLH TQRDVRVLSE 60 FQSTVKQCVY NEQFKKFEAL EYHYNVCEAL LLWEQYRNMT TVLTREYLDV RPKGWEEYAA 120 QRIAQLGTKK CYNKTLCEEH LNVLLPAKPP FHPRQFRTCA VVGNSGDLLM TEFGKEIDSH 180 DAVIRDNEAP VNEKYAKYVG MKRDFRLVVR GAARNMVSIL NGSADEVLII KSVTHKDFNA 240 MIKSITNPVY LFQGIVLRRG AKGTGMKSVE LALSXCDIVD IYGFTVDPGY TEWTRYFSTP 300 RKGHNPLQGR AYYQLLECLG VIRIHSPMRS KRKQDWSDVP SREMIGRAHA AALRLKRGEA 360 GDLGQFGSCK VSGNVDADKV GPVSGSPDMS DKRKFSNYNK WEVLPFKSLR KEAQDHYIQM 420 EGVSLYKMDG NKLDDLLXYC IRYDMSHMTA FRSANALLKV KTPTPRPRVP DSPKPFLNPN 480 LNAQNSVDAR LIKTGFDAHT CRSNFLVKNF LNRGELSRAR QLFDQMPHKN TVSTNMMISS 540 YVNSGNLSKA REXLDTMVDR TAVTWTILIG GFSQANRYHE AFKLYADMHR WGTKPDYVTF 600 ATLLSGCSDM GTTEQVVQVH SHVLKLGXAS TLMVCNSLID SYCKSHRLDL ACRLFKEMPE 660 RDNVTFNALI TGYSKDNLNE EAVNLFAQMQ NLGHKPSEFT FAAVLCAGXN LDDIAFGQQV 720 HGFVVKTNFV WNVFVGNALL DFYSKHESSV EARKLFDEMP ELDGISYNVI ITSHVWDGQF 780 KESLDLFREL QLTKHDRKKF PFPTMLSIAS NTLNLNMGRQ IHSQAIIVTA DSEIQVGNSL 840 VDMYAKCGRF EEAKRIFTTL ADRSAVPWTA MISGYAQNGV HEEGLELFNE MRRANVSPDQ 900 ATFASILRAS ASLASLSLGK QLHSSVIKLG FTSNVFPASA LLDMYAKCGS MKDALQFFQE 960 MPKRNRVCWN ALISAYALNG DGKGTLRSFK QMVQSGFEPD SVSFLSVLTA CSHCGLVDEG 1020 LQYFNSLTCN TKIVPKREHY ASMVDLLCRS GRFGEAEKLM AEMPFEPDEI MWSSVLNSCK 1080 IHKNQELAER AADRLFKMEK LRDAGAYVSM SNIYAATGQW ESVGKVKKAM RERGIRKEME 1140 KEGYKPDISC ALHNEDEEIK VESLKYHSER LAIAFALIST PEGSPIVVMK NLRACTDCHA 1200 AIKVITKXVG REIIVRDSSR FHHFRDGXCS CGDFW 1260 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN03077 | PLN03077 | 2.0e-33 | 476 | 790 | 332 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 5.0e-58 | 680 | 1086 | 408 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 1.0e-60 | 479 | 975 | 499 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 1.0e-73 | 580 | 1110 | 546 | + Protein ECB2; Provisional | ||
| PLN03077 | PLN03077 | 1.0e-157 | 535 | 1233 | 736 | + Protein ECB2; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008373 | sialyltransferase activity |
| GO:0030173 | integral to Golgi membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAU90328.2 | 0 | 487 | 1235 | 33 | 819 | Pentatricopeptide repeat domain containing protein, putative [Solanum demissum] |
| GenBank | AAU90328.2 | 0 | 611 | 1078 | 23 | 521 | Pentatricopeptide repeat domain containing protein, putative [Solanum demissum] |
| EMBL | CBI21281.1 | 0 | 448 | 1235 | 1 | 785 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002275669.1 | 0 | 5 | 1235 | 49 | 1332 | PREDICTED: hypothetical protein, partial [Vitis vinifera] |
| RefSeq | XP_002303012.1 | 0 | 458 | 1235 | 1 | 815 | predicted protein [Populus trichocarpa] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wml_A | 0.0000000007 | 157 | 309 | 98 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 2wnf_A | 0.0000000007 | 157 | 309 | 98 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase |
| PDB | 2wnb_A | 0.0000000007 | 157 | 309 | 98 | 266 | A Chain A, Crystal Structure Of A Mammalian Sialyltransferase In Complex With Disaccharide And Cmp |
