Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000305229 |
Family | CBM57 |
Protein Properties | Length: 538 Molecular Weight: 61135.9 Isoelectric Point: 8.6153 |
Chromosome | Chromosome/Scaffold: 016465497 Start: 3028 End: 11014 |
Description | Leucine-rich repeat transmembrane protein kinase |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM57 | 293 | 454 | 1.8e-23 |
HINCGGKEVTIENTTYEDDTFSVGPSSFYQSRTNWALSSTGYFPDDNRATDNFIWTNETRLYMANPQLYMNARLSPISLTYFGFCLQNRKYTVSLHFAEL MFRSGNTYKSLGRRVFDIYIQDIQVLPDFNIMDYASVFGNVVSFTADVTNHTLKIRLYWAGK |
Full Sequence |
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Protein Sequence Length: 538 Download |
MVRLKYLQEI DLTRNYLNGT IPPEWSSLQL VNISLXGNRL TGPIPVXFGN IXTLKXLILS 60 SNXFTGXLPX XFAXLXXLKD LMLRSCNIIG ELPSYLGQMT KLKALDLSYN KLTGEIPSSY 120 ASLAKAEGFA TLXSDELEVL LITLTIIKDS QREDEKFLPL GVSTSRSEVW PLDPLVCSLN 180 LARFWLTFLR RWCRRRSWGS PLDESGGGAW SYKGSRLSEK REGWGDLMDG YRESRVRKRG 240 NEKGMEIDGK LVEAEQSTMI DARAPFHCAK RWLKGVSCST AAKCPKTWYS SFHINCGGKE 300 VTIENTTYED DTFSVGPSSF YQSRTNWALS STGYFPDDNR ATDNFIWTNE TRLYMANPQL 360 YMNARLSPIS LTYFGFCLQN RKYTVSLHFA ELMFRSGNTY KSLGRRVFDI YIQDIQVLPD 420 FNIMDYASVF GNVVSFTADV TNHTLKIRLY WAGKGTTGIP VRGVYGPLIS AISVEPADGE 480 EDFCKNLREL QGEEFRGKVL SFIHTSHNTC KRYITVGERE ILSLRYKTQI QPFMQSTI 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN00113 | PLN00113 | 3.0e-16 | 7 | 119 | 113 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 5.0e-17 | 3 | 123 | 145 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 1.0e-17 | 4 | 122 | 120 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
PLN00113 | PLN00113 | 2.0e-21 | 7 | 127 | 124 | + leucine-rich repeat receptor-like protein kinase; Provisional | ||
pfam11721 | Malectin | 3.0e-53 | 291 | 472 | 187 | + Di-glucose binding within endoplasmic reticulum. Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan. |
Gene Ontology | |
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GO Term | Description |
GO:0005515 | protein binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20121.1 | 0 | 1 | 476 | 104 | 587 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20124.1 | 0 | 1 | 476 | 133 | 616 | unnamed protein product [Vitis vinifera] |
EMBL | CBI20127.1 | 0 | 1 | 476 | 104 | 587 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_002283596.1 | 0 | 1 | 476 | 133 | 616 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002524511.1 | 0 | 3 | 474 | 106 | 561 | ATP binding protein, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3rj0_A | 0.00000000001 | 7 | 117 | 393 | 504 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3rj0_A | 0.000000006 | 1 | 117 | 336 | 456 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3rj0_A | 0.000000007 | 7 | 126 | 246 | 366 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3rj0_A | 0.0000006 | 4 | 119 | 438 | 554 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3rj0_A | 0.00002 | 3 | 117 | 195 | 308 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB892260 | 207 | 273 | 476 | 0 |
CV535990 | 191 | 288 | 476 | 0 |
FE709838 | 204 | 276 | 476 | 0 |
EY155107 | 175 | 304 | 476 | 0 |
CB633727 | 190 | 291 | 477 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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