y
Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000306824 |
Family | CBM43 |
Protein Properties | Length: 408 Molecular Weight: 43657.9 Isoelectric Point: 7.1441 |
Chromosome | Chromosome/Scaffold: 016706228 Start: 10863 End: 12297 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 321 | 403 | 2.4e-33 |
WCVAKPTVPSDTLQVAMDYACGDGGADCSEIMSDGNCYSPDSVVAHASYAFNSYWQKNKKTGGTCSFDGTAMLINNDPSYLQC |
Full Sequence |
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Protein Sequence Length: 408 Download |
MLKTKMVFFF HLLFLLSFGV SGERQDSIVS VKSGDLSEVA SSILKAETWL KTHVLAHYPS 60 APITAIVVGG VGGVPLLLCR KEQEHTLTLI LPAVKNLHHS LTRWGLQEHI KLSPAFAPSC 120 FVRSSYIFGK FVRPVLDFLK GASQTVSPTL VSSHSESLED FIGVSFNFDD YTVVLDNPGE 180 RKPSGRKLSA DPFPARPKPL PKISETPLHS TVGLSVPANV AKNPHPPLPQ TASPPLQVPS 240 PQPQSAVSPP PLLPSPEAQT ASPPPPQIAS PPDTGFSSAP ENPPFVDDSP PPSPATIPPC 300 RPTHVPPPAP APQTAVHNKL WCVAKPTVPS DTLQVAMDYA CGDGGADCSE IMSDGNCYSP 360 DSVVAHASYA FNSYWQKNKK TGGTCSFDGT AMLINNDPSY LQCRFILT 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 0.0002 | 28 | 154 | 135 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 1.0e-27 | 320 | 392 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-41 | 320 | 405 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACU22745.1 | 0 | 166 | 408 | 7 | 206 | unknown [Glycine max] |
EMBL | CBI33700.1 | 0 | 1 | 406 | 1 | 355 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_201547.1 | 0 | 6 | 408 | 4 | 380 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002279597.1 | 0 | 1 | 406 | 1 | 411 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525263.1 | 0 | 29 | 404 | 52 | 418 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 5e-16 | 308 | 405 | 3 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.0002 | 28 | 115 | 51 | 130 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 4gzj_A | 0.006 | 20 | 139 | 45 | 166 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 4gzi_A | 0.006 | 20 | 139 | 45 | 166 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |
PDB | 3ur8_B | 0.006 | 20 | 139 | 45 | 166 | A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose |