| Basic Information | |
|---|---|
| Species | Malus domestica |
| Cazyme ID | MDP0000306862 |
| Family | CE8 |
| Protein Properties | Length: 324 Molecular Weight: 35940.4 Isoelectric Point: 8.7942 |
| Chromosome | Chromosome/Scaffold: 016767566 Start: 7805 End: 10461 |
| Description | Pectin lyase-like superfamily protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| CE8 | 30 | 314 | 0 |
| ITVRKDGTGQFRTVTDAVNSIPSGNTRRVVVFIGGGVYTEKVLVDASKPFVTFYGDQNDVPSITFDGTALKYGTWNSSTVAVESDYFVAVNIAFVNSAPM PDGIRPGAQAVAMRISGDKAAFHNCRFIGFQDTLLDDRGRHFFKDCHVQGTVDFIFGNGKSLYLNNTIHSVANGMGVITAHARENVEDDSGFAFVHCNIT GTGDTFLGRAWRERPRVVFAYAYMGSLINKQGWSDYMHTERDKTVYYGEYKCMGPGSSSSGRVKYARMLSDEEAKPFLSLTFIKG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 324 Download |
| MRDYANRKAT QXTLRFDAQL LSAEEIVRII TVRKDGTGQF RTVTDAVNSI PSGNTRRVVV 60 FIGGGVYTEK VLVDASKPFV TFYGDQNDVP SITFDGTALK YGTWNSSTVA VESDYFVAVN 120 IAFVNSAPMP DGIRPGAQAV AMRISGDKAA FHNCRFIGFQ DTLLDDRGRH FFKDCHVQGT 180 VDFIFGNGKS LYLNNTIHSV ANGMGVITAH ARENVEDDSG FAFVHCNITG TGDTFLGRAW 240 RERPRVVFAY AYMGSLINKQ GWSDYMHTER DKTVYYGEYK CMGPGSSSSG RVKYARMLSD 300 EEAKPFLSLT FIKGTKWVLP PPKL 360 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02634 | PLN02634 | 1.0e-98 | 27 | 320 | 302 | + probable pectinesterase | ||
| PLN02671 | PLN02671 | 3.0e-101 | 28 | 318 | 302 | + pectinesterase | ||
| PLN02304 | PLN02304 | 8.0e-102 | 27 | 320 | 303 | + probable pectinesterase | ||
| PLN02682 | PLN02682 | 1.0e-118 | 28 | 320 | 301 | + pectinesterase family protein | ||
| PLN02665 | PLN02665 | 0 | 2 | 324 | 325 | + pectinesterase family protein | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005618 | cell wall |
| GO:0030599 | pectinesterase activity |
| GO:0042545 | cell wall modification |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI27759.1 | 0 | 2 | 322 | 70 | 388 | unnamed protein product [Vitis vinifera] |
| EMBL | CBI38547.1 | 0 | 1 | 324 | 45 | 365 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002277518.1 | 0 | 2 | 322 | 58 | 376 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002326144.1 | 0 | 1 | 324 | 46 | 374 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002516214.1 | 0 | 16 | 324 | 67 | 378 | Pectinesterase-3 precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1xg2_A | 1.4013e-45 | 26 | 318 | 1 | 304 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
| PDB | 1gq8_A | 1.4013e-45 | 30 | 318 | 9 | 308 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_B | 5e-21 | 40 | 306 | 18 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntq_A | 5e-21 | 40 | 306 | 18 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| PDB | 2ntp_B | 5e-21 | 40 | 306 | 18 | 328 | A Chain A, Pectin Methylesterase From Carrot |
| Hydropathy |
|---|
 |
| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| CV051695 | 198 | 127 | 324 | 0 |
| CV049340 | 199 | 38 | 236 | 0 |
| DY263772 | 310 | 1 | 307 | 0 |
| DY300051 | 291 | 1 | 289 | 0 |
| DY300112 | 286 | 1 | 284 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
|---|
 |
