Basic Information | |
---|---|
Species | Malus domestica |
Cazyme ID | MDP0000308560 |
Family | GT47 |
Protein Properties | Length: 862 Molecular Weight: 97833.2 Isoelectric Point: 9.774 |
Chromosome | Chromosome/Scaffold: 019522105 Start: 4408 End: 11557 |
Description | Exostosin family protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT47 | 345 | 630 | 0 |
NTLKVYVYREGERPILHSPFLRGIYASEGWFMKQMEADKRFVTKNPRKAHLYYLPFSSRRLEESLYVPNSHNHKNLVQYLKDYVDMIAGKYPFWNRTGGA DHFLVACHDWLLLQAPSETKKIMAKCIRALCNADVKEGFVVGKDVSLPETYIKNDKKPLRDLGGNRPSKRSILAFFAGSMHGYVRPILLQHWENKDPDMQ IFGQLPEGKGNKNYVRHMQSSKYCICAKGYEVNSPRVVEAIFYECVPVIISDNFVPPFFEVLQWESFAVFVLEKDIPNLKNILLSI |
Full Sequence |
---|
Protein Sequence Length: 862 Download |
MGQELLSQCQ VKTRTLLWIV GMLFAVILVV QHLELPYGTV LSSMLSAAKV PVEGKSRFQA 60 VDSPSDSEAV GNVSLSNDLN YTGTYGIHKI ANDTRTSGFV LERNEVSNRT LEIDEDTGDD 120 QEEPSDNFAK QNRTFIVENV NPLETDVEQE QRHSSFEKKN TTDATFSEGG TRNESNTTDE 180 VVNSTAGFPT ASPASPMINS SSIAAPAIIE SNVGAPPIAV GSNVTLVQKD QTTLSQKPKS 240 SEQLHSNLSR TEQSSSPTRV PEMNKEPEVP ALDVYSISDM NQLLRKSRSS YHSVKPRWSS 300 TVDRELLYAA SQIENAPLLK SDQTLYAPLY RNLSMFKRSY ELMENTLKVY VYREGERPIL 360 HSPFLRGIYA SEGWFMKQME ADKRFVTKNP RKAHLYYLPF SSRRLEESLY VPNSHNHKNL 420 VQYLKDYVDM IAGKYPFWNR TGGADHFLVA CHDWLLLQAP SETKKIMAKC IRALCNADVK 480 EGFVVGKDVS LPETYIKNDK KPLRDLGGNR PSKRSILAFF AGSMHGYVRP ILLQHWENKD 540 PDMQIFGQLP EGKGNKNYVR HMQSSKYCIC AKGYEVNSPR VVEAIFYECV PVIISDNFVP 600 PFFEVLQWES FAVFVLEKDI PNLKNILLSI PKKRYLQMQM RVRRVQQHFL WHAKPEKDWW 660 WESMATSVKV KSGGNLQDGS SKGKIGYSVT KKKIDSSSSK QAADYKQKSV QTVTKTEVKS 720 KPNSASKTIT KKTTTKVREK KVYTLAGQKF DPPEEREPLR IFYESLSKQI PTSEMAEFWM 780 MEHGLLSSER SRKAYEKKQR KQKQLRLGTP LKSTPKPASK PESSQRPQQQ ASKNGDVKAK 840 KRVIKESDDD DDFILSSKRR RA |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03016 | Exostosin | 4.0e-71 | 347 | 630 | 301 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI20855.1 | 0 | 1 | 657 | 1 | 582 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_197954.1 | 0 | 10 | 657 | 10 | 633 | exostosin family protein [Arabidopsis thaliana] |
RefSeq | XP_002281263.1 | 0 | 1 | 657 | 1 | 647 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002309547.1 | 0 | 218 | 657 | 12 | 449 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002324801.1 | 0 | 280 | 657 | 1 | 376 | predicted protein [Populus trichocarpa] |