Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000311086 |
Family | CBM43 |
Protein Properties | Length: 293 Molecular Weight: 30364.3 Isoelectric Point: 6.0836 |
Chromosome | Chromosome/Scaffold: 020642342 Start: 10769 End: 16578 |
Description | Carbohydrate-binding X8 domain superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 153 | 235 | 8.9e-34 |
WCVSSQSASQMALQVALDYACGYGGTDCSEIQPGRSCYNPNNVRDHASFAFNNYYQKNPVPNSCNFGGTAVITSTDPSTGTCQ |
Full Sequence |
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Protein Sequence Length: 293 Download |
MDGANQGSLG ADAPNQKFLA SSLLAPSPKS TDPWDGLSDI VGGVLDYPVR VGAESAGLKV 60 TKKEKNIGHS KEQDQENKGM KFPKTLISTT QRDITTPITT VPTIXPTNPT SSTPIVNPNS 120 NPADSTFPVT TTPSMTPYTA TTPSPPASTG SSWCVSSQSA SQMALQVALD YACGYGGTDC 180 SEIQPGRSCY NPNNVRDHAS FAFNNYYQKN PVPNSCNFGG TAVITSTDPS TGTCQYPSTS 240 TSSSVLNTTN TSGSTVFGAV PSGPTTSAAI VAANSSHGVH NLFIVACFLV LTT 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-15 | 164 | 223 | 66 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-31 | 164 | 236 | 74 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC79758.1 | 0 | 89 | 249 | 51 | 205 | hypothetical protein OsI_21142 [Oryza sativa Indica Group] |
GenBank | EEE64827.1 | 0 | 89 | 249 | 51 | 205 | hypothetical protein OsJ_19684 [Oryza sativa Japonica Group] |
RefSeq | NP_001031450.1 | 0 | 129 | 291 | 60 | 219 | unknown protein [Arabidopsis thaliana] |
RefSeq | XP_002283721.1 | 0 | 72 | 291 | 27 | 233 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002441577.1 | 0 | 75 | 249 | 24 | 170 | hypothetical protein SORBIDRAFT_09g029700 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 8e-17 | 142 | 240 | 2 | 100 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CN549719 | 130 | 164 | 293 | 3.99931e-42 |
DT494383 | 130 | 164 | 293 | 4.99983e-42 |
EE256957 | 127 | 164 | 290 | 9.99967e-42 |
CF236179 | 130 | 164 | 293 | 3.00004e-41 |
BU894548 | 130 | 164 | 293 | 4.99997e-41 |
Sequence Alignments (This image is cropped. Click for full image.) |
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