Basic Information | |
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Species | Malus domestica |
Cazyme ID | MDP0000311338 |
Family | GT5 |
Protein Properties | Length: 300 Molecular Weight: 33500.6 Isoelectric Point: 8.8651 |
Chromosome | Chromosome/Scaffold: 020078199 Start: 1936 End: 5610 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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NCBI Taxonomy |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT5 | 16 | 210 | 3.4e-40 |
SSFFNRERLYGYSDDFERFTYFSRASLDYIVKSGKRPDVIHIHNWETAIIGPLFWDITVKQCLEHPEKLELCGLDPAGLHRPDRLQDNTKAHLVNILKGG VVYSNKVVIMSSILSKGRVIQSLSHGLDPTLNIHKNKVIIAPCGFDNSTWDPSTDNFLPVQYNAKDMKGKTVCKAALQQHLGLSEHASTFLVGCI |
Full Sequence |
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Protein Sequence Length: 300 Download |
IVYGIGVTLI QPVYYSSFFN RERLYGYSDD FERFTYFSRA SLDYIVKSGK RPDVIHIHNW 60 ETAIIGPLFW DITVKQCLEH PEKLELCGLD PAGLHRPDRL QDNTKAHLVN ILKGGVVYSN 120 KVVIMSSILS KGRVIQSLSH GLDPTLNIHK NKVIIAPCGF DNSTWDPSTD NFLPVQYNAK 180 DMKGKTVCKA ALQQHLGLSE HASTFLVGCI FSKVSDVDLE KLREIFSKTS GIDVQKNVWL 240 SGRALLNAFT VCXGVFLQYI VMGIGKISSV NKLGSLHEPL KVQVALPRVR CVNDICGKSL 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG0297 | GlgA | 3.0e-23 | 16 | 210 | 214 | + Glycogen synthase [Carbohydrate transport and metabolism] | ||
cd03791 | GT1_Glycogen_synthase_DULL1_like | 5.0e-38 | 18 | 210 | 224 | + This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. | ||
TIGR02095 | glgA | 4.0e-38 | 4 | 210 | 224 | + glycogen/starch synthase, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. | ||
PRK00654 | glgA | 5.0e-40 | 4 | 210 | 225 | + glycogen synthase; Provisional | ||
PLN02939 | PLN02939 | 5.0e-59 | 2 | 229 | 247 | + transferase, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACD13787.1 | 0 | 1 | 281 | 280 | 556 | starch synthase V precursor [Lotus japonicus] |
GenBank | ACD13788.1 | 0 | 1 | 281 | 273 | 547 | starch synthase V precursor [Solanum tuberosum] |
GenBank | ACD13789.1 | 0 | 1 | 235 | 277 | 528 | starch synthase V precursor [Vitis vinifera] |
RefSeq | XP_002310316.1 | 0 | 1 | 229 | 266 | 511 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002528907.1 | 0 | 1 | 283 | 285 | 561 | starch synthase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1rzv_B | 0.000000004 | 27 | 227 | 104 | 318 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzv_A | 0.000000004 | 27 | 227 | 104 | 318 | A Chain A, Crystal Structure Of The Glycogen Synthase From Agrobacterium Tumefaciens (Non-Complexed Form) |
PDB | 1rzu_B | 0.000000004 | 27 | 227 | 104 | 318 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 1rzu_A | 0.000000004 | 27 | 227 | 104 | 318 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
PDB | 3cx4_A | 0.00009 | 4 | 198 | 76 | 286 | A Chain A, Crystal Structure Of The Glycogen Synthase From A. Tumefaciens In Complex With Adp |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BU039925 | 217 | 33 | 232 | 0 |
GR192508 | 249 | 4 | 235 | 0 |
EY766100 | 222 | 1 | 205 | 0 |
FE692410 | 262 | 5 | 247 | 0 |
EH710843 | 212 | 1 | 195 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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